Xray_psf_create_v31

!xmipp_xray_psf_create (v3.1)

Usage

Create a volume with the 3D PSF of an X-ray microscope. A param file can be passed or directly setting the microscope parameters. The program generates a PSF volume file and its associated info file.

See also Xray_project_v3

Parameters

$: XRay-Microscope parameters file. $: Name for output files. It creates a PSF volume file and a PSF parameters file. $--lambda <v2.43> $--out_width <deltaR40> $--zones <N560> $--mag <Ms2304> $--sampling <dxy10> <dz=dxy> $--zshift <deltaZ0> $--size <x> <yx> <z=x> $--type <lens_typeideal> where <lens_type> can be:

Examples and notes

The parameters are in a file

xmipp_xray_psf_create -i psf560.xmd -o psf560.vol

The parameters are given in the command line

xmipp_xray_psf_create -o psf900.vol -lambda 2.5 -zones 900

In the following link you can find an example of X-ray microscope parameters file:

 http://sourceforge.net/p/testxmipp/code/ci/3.0/tree/input/xray_psf.xmd

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