FormatConversion

spider to mrc . This can be done by using the xmipp command as follows

xmipp_spi22ccp4  -i proj00001.spi -o 00001.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00002.spi -o 00002.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00003.spi -o 00003.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00004.spi -o 00004.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00005.spi -o 00005.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00006.spi -o 00006.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00007.spi -o 00007.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00008.spi -o 00008.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00009.spi -o 00009.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00010.spi -o 00010.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00011.spi -o 00011.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00012.spi -o 00012.mrc -reverse_endian
xmipp_spi22ccp4  -i proj00013.spi -o 00013.mrc -reverse_endian

Oy ou may use a shell script like:

#!/usr/bin/env csh
foreach img (proj?????.spi)
  set out=`echo ${img} |awk -F".spi" '{print $1".mrc"}'`
  xmipp_spi22ccp4  -i ${img} -o ${out} -reverse_endian
end

-- Main.JavierRodriguez - 12 Mar 2007