Transform_range_adjust_v3

!xmipp_transform_range_adjust (v3.0)

Usage

Adjust the grey level value of the pixels to a specified range.

See also Transform_normalize_v3

Parameters

$``: Input file: metadata, stack, volume or image. $--mode <modeoverwrite> where <mode> can be:

• • $--label <image_labelimage> $-o, --output <output_file> $--oroot <root> $``: Output minimum and maximum values. $--noise <sigma0> $`--mask <mask_type`circular> where <mask_type> can be:
  • $--center <x00> <y0=0> <z0=0>

Examples and notes

Adjust an image in the range [-1, 1]:

xmipp_transform_range_adjust -i image.xmp -o image_adjust.xmp --range -1 1

Adjust images in a stack applying a circular mask:

xmipp_transform_range_adjust -i images.stk -o image_adjust.stk --range -1 1 --mask circular -32

Adjust a selection file in the range [-100, 100] with sigma noise 10:

xmipp_transform_range_adjust -i selection.sel --oroot images/im_adjust:spi -o selection_adjust.sel --range -100 100 --noise 10

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