DevelopersStuff

How to install

• Please visit the Xmipp repository to install Xmipp. Please, visit also the Scipion's documentation

Programming on Xmipp

• API C++ Reference Complete references to modules, classes and functions.
• API Java Reference Complete references to modules, classes and functions.
• API Python Reference Complete references to modules, classes and functions.
• Emx: libraries for accesing emx files
• GuideLines.
• Learn how to use the Xmipp core classes:
  • MultidimArray, MultidimArrayGeneric, etc.
  • Image, ImageGeneric, etc.
  • MetaData, MDLabel, MDQuery, etc.
  • FourierTransformations, Filters, etc.
  • Programs.
• ParallelProgramming Use of the classes for parallelization with Threads and MPI.
• XmippBindings.
• XmippOverview This will show you the big picture of the package structure.
• XmippPythonJava Using Xmipp libraries from other programming languages.
• XmippTests Create tests for functions and programs.
• ReleaseManagement - details to think of in between big versions release
• UnusedCode How to work with the unused repository

Development Tools

• EclipSe Find out how to setup Eclipse IDE for Xmipp development
• Git Review most used git commands. You can also take a look at our repository statistics.
• DebuggingProfiling using DebuggingProfiling#Using_Valgrind_for_memory_check, DebuggingProfiling#Profiling_with_GProf, DebuggingProfiling#Profiling_with_Oprofiler, DebuggingProfiling#Profiling_with_Zoom and DebuggingProfiling#Profiling_in_Python

Best practices

• MetaData---SQL-best-practices Best practices when dealing with Metadata