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Pdb_nma_deform_v31

Adrian Quintana edited this page Dec 11, 2017 · 1 revision

!xmipp_pdb_nma_deform (v3.1)

Usage

Deform a PDB according to a list of NMA modes It is assumed that there is a deformation value per mode, and that the number of vectors in the mode is the same as the number of atoms in the PDB

Parameters

$: PDB to deform $: List of modes, the metadata must use the label NMAModefile $: Deformation amplitudes in each direction $: Deformed PDB

Examples and notes

xmipp_pdb_nma_deform --pdb 2tbv.pdb -o 2tbv_deformed.pdb --nma modelist.xmd --deformations 15

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