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Tomo_detect_missing_wedge_v3
Detect the orientation of the missing wedge in a tomogram. For doing so it fits a couple of planes along which there is a maximum variation between the energy of the Fourier transform on its left and on its right. The missing wedge is coded with four angles (two for each plane). You may also produce a mask with 1 where the missing wedge is, and 0 where the data has been actually measured. Finally, you can also produce a marked magnitude volume (i.e., the magnitude of the Fourier transform where the position of the two planes have been marked).
Parameters
$: Input tomogram $`--maxFreq <f`0.25> $`--width <w`2> $: Save the magnitude of the FFT with marks showing the two planes $``: Save a mask for the FFT of this tomogram 1=Missing wedge, 0=non missing wedge
xmipp_tomo_detect_missing_wedge -i tomogram.vol