Wellcome Connecting Science

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92 repositories

Molecular_Approaches_Clinical_Microbiology_2025
Public
Discover the revolutionary potential of molecular and genomic techniques in clinical microbiology for tackling infectious diseases
R
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•6•1•0•0•Updated Aug 5, 2025Aug 5, 2025
CRISPR_informatics_2025
Public
Explore the therapeutic applications of pooled and arrayed CRISPR screens
crispr
Jupyter Notebook
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•5•0•0•0•Updated Aug 5, 2025Aug 5, 2025
Association_Studies_2025
Public
Learn the latest statistical methods and software for analysis of genetic association studies
gwas association-studies
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•3•0•0•0•Updated Aug 4, 2025Aug 4, 2025
index
Public
Index for WCS course material
3•3•0•0•Updated Jul 18, 2025Jul 18, 2025
GenEpiLAC2025
Public
Learn how to apply genomics to epidemiological surveillance of bacterial pathogens.
HTML
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•5•1•0•0•Updated Jul 11, 2025Jul 11, 2025
Single_Cell_Genomics_2025
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Empowering researchers with practical strategies to overcome challenges, optimise resources, and drive impactful single-cell research
Other
•8•1•0•0•Updated Jul 11, 2025Jul 11, 2025
Single_Cell_Genomics
Public
This is the landing page for single cell genomics course
Jupyter Notebook
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•8•0•0•1•Updated Jul 7, 2025Jul 7, 2025
PRS_2025
Public
This short course is designed to equip scientists based in Africa with the skills and knowledge to perform polygenic risk scores (PRS) analysis.
polygenic-risk-scores
Jupyter Notebook
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•6•2•0•0•Updated Jul 4, 2025Jul 4, 2025
PRS_2024
Public
Shell
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•2•0•0•0•Updated Jun 23, 2025Jun 23, 2025
K-mer_Biodiversity_Genomics_2025
Public
Introduction and advanced uses of k-mers in biodiversity genomics using modern k-mer tools and methods.
k-mer biodiversity-genomics
Other
•4•9•0•0•Updated Jun 16, 2025Jun 16, 2025
Fungal_Pathogen_Genomics_2025
Public
Hands-on training in web-based data-mining resources for fungal genomes
fungal-pathogen
Other
•5•2•0•0•Updated Jun 10, 2025Jun 10, 2025
Helminth_Bioinformatics_2025
Public
Practical hands-on training in helminth genome analysis
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•3•1•0•1•Updated Jun 6, 2025Jun 6, 2025
SAGESA-AMR-Genomics-Network
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AMR Network Resources
Other
•5•4•0•0•Updated Apr 25, 2025Apr 25, 2025
Genome_Academy_Programme
Public
The manual space for the Wellcome Connecting Science Genome Academy Event
Other
•1•0•0•0•Updated Apr 16, 2025Apr 16, 2025
WCS_Informatics_Guides
Public
This repository is designed to support the training team & course attendees by providing clear and structured documentation for every stage of the course—from preparation to hands-on execution.
wellcome-connecting-science training-guides
Other
•0•0•0•0•Updated Apr 15, 2025Apr 15, 2025
.github
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Wellcome Connecting Science is producing open courses for genomics, bioinformatics and molecular biology
0•1•0•0•Updated Apr 15, 2025Apr 15, 2025
NGS_Bioinformatics_2025
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Hands-on lab and informatics training for long and short read sequencing
bioinformatics next-generation-sequencing wellcome-connecting-science
Jupyter Notebook
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•11•4•0•0•Updated Apr 3, 2025Apr 3, 2025
Cancer_Genome_Analysis_2025
Public
Learn to analyse genomics data from cancer samples with hands-on practical exercises in mutation calling, driver gene identification, mutational signature analysis and RNA deconvolution.
cancer-genomics
Roff
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•4•3•0•0•Updated Mar 27, 2025Mar 27, 2025
GCV_2025
Public
Master cutting-edge genomics and bioinformatics approaches to advance viral diagnostics and investigation
genomics virology wellcome-connecting-science clinical-virology
Python
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•4•2•0•0•Updated Mar 10, 2025Mar 10, 2025
Low_Input_Epigenomics
Public
Learn the latest approaches to study chromatin biology at the gene and genome-wide levels in rare cell populations
Other
•2•8•0•0•Updated Mar 7, 2025Mar 7, 2025
AMR_2025
Public
Learn antimicrobial susceptibility testing techniques and how whole-genome sequencing and bioinformatics can be used to understand AMR
pathogen amr bacterial wellcome-connecting-science
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•5•1•0•0•Updated Feb 14, 2025Feb 14, 2025
Precourses_DataRepo
Public
Repository for Pre-courses Wellcome Connecting Science
Jupyter Notebook
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•1•0•0•0•Updated Feb 12, 2025Feb 12, 2025
GCM_2025
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Training in molecular and genomic techniques for microbiological diagnostics and infection epidemiology
genomics clinical microbiology
Other
•4•2•0•0•Updated Feb 7, 2025Feb 7, 2025
African_Genomic_Diversity
Public
Other
•0•0•0•0•Updated Jan 27, 2025Jan 27, 2025
GenEpi_Bacterial_Pathogen
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Learn how to apply genomics to epidemiological surveillance of bacterial pathogens.
HTML
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Other
•5•0•0•1•Updated Jan 27, 2025Jan 27, 2025
Polygenic_Risk_Scores
Public
This is a landing page for the Polygenic Risk Scores Course Developed and Delivered by Wellcome Connecting Science
Shell
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Other
•6•2•0•1•Updated Jan 14, 2025Jan 14, 2025
Helminth_Bioinformatics
Public
Practical hands-on training in helminth genome analysis
HTML
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Other
•3•0•0•1•Updated Jan 3, 2025Jan 3, 2025
Helminth_Bioinformatics_2023
Public archive
Practical hands-on training in helminth genome analysis.
HTML
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Other
•2•1•0•0•Updated Jan 3, 2025Jan 3, 2025
Fungal_Pathogen_Genomics
Public
Hands-on training in web-based data-mining resources for fungal genomes
Other
•5•3•0•0•Updated Jan 3, 2025Jan 3, 2025
Cancer_Genome_Analysis
Public
Learn to analyse genomics data from cancer samples with hands-on practical exercises in mutation calling, driver gene identification, mutational signature analysis and RNA deconvolution.
cancer-genomics wellcome-connecting-science cancer-genomics-analysis
HTML
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Other
•4•1•0•0•Updated Jan 3, 2025Jan 3, 2025