This repository describes a workflow for automated PD-L1 scoring of Tumor Proportion Score (TPS), Combined Positive Score (CPS) and Immune Cell Score (ICS) with QuPath and MATLAB.
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Updated
Apr 27, 2022 - Groovy
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pd-l1
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🔬 First computational framework for p62/SQSTM1 condensate-mediated PD-L1 regulation | GPU-accelerated LLPS predictions | TCGA analysis (n=100) | Publication-ready (PLoS Comp Bio → Nature Comm) | Fast, Precise, Truthful
bioinformatics deep-learning reproducible-research systems-biology computational-biology tcga open-science lung-cancer gpu-computing autophagy pd-l1 cancer-immunotherapy alphafold llps liquid-liquid-phase-separation protein-language-model biomolecular-condensates immune-checkpoint saprot p62-sqstm1
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Updated
Nov 8, 2025 - Python
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