The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell resolution.

Constructing Neoantigen Vaccine Pipeline with pVACtools

the peptide immune annotator pipeline (PIA-P) a collection of bash and Python scripts used running peptide HLA interaction from a variety of inputs

🔬 First computational framework for p62/SQSTM1 condensate-mediated PD-L1 regulation | GPU-accelerated LLPS predictions | TCGA analysis (n=100) | Publication-ready (PLoS Comp Bio → Nature Comm) | Fast, Precise, Truthful