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biomolecular-condensates

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achattaraj / maximal_Solubility_product

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Python scripts to analyze and visualize the data presented in the research article: "The maximum solubility product marks the threshold for condensation of multivalent biomolecules".

python molecular-simulation data-visualisation langevin-dynamics rule-based-modeling bionetgen phase-transition data-analysis-python llps springsalad multivalent-clustering biomolecular-condensates nfsim molclustpy
  • Updated Apr 4, 2023
  • Jupyter Notebook

thc1006 / p62-pdl1-llps-starter

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🔬 First computational framework for p62/SQSTM1 condensate-mediated PD-L1 regulation | GPU-accelerated LLPS predictions | TCGA analysis (n=100) | Publication-ready (PLoS Comp Bio → Nature Comm) | Fast, Precise, Truthful

bioinformatics deep-learning reproducible-research systems-biology computational-biology tcga open-science lung-cancer gpu-computing autophagy pd-l1 cancer-immunotherapy alphafold llps liquid-liquid-phase-separation protein-language-model biomolecular-condensates immune-checkpoint saprot p62-sqstm1
  • Updated Nov 8, 2025
  • Python

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