v0.8.5

Unfold v0.8.5

Diff since v0.8.4

• new function StatsAPI.r2 calculating coefficient of determination
• new tutorial how to exclude bad data from model-fit
• 🐍 documentation fixes

Merged pull requests:

• CompatHelper: bump compat for BSplineKit to 0.19, (keep existing compat) (#259) (@github-actions[bot])
• CompatHelper: bump compat for BSplineKit in [weakdeps] to 0.19, (keep existing compat) (#260) (@github-actions[bot])
• [AUTO] pre-commit update (#261) (@github-actions[bot])
• CompatHelper: bump compat for Krylov in [weakdeps] to 0.10, (keep existing compat) (#262) (@github-actions[bot])
• CompatHelper: bump compat for Krylov to 0.10, (keep existing compat) (#263) (@github-actions[bot])
• Unify landingpage - Update doc links to the respective UnfoldDocs pages. (#264) (@xuyg16)
• new tutorial, addressing #270 (#271) (@behinger)
• feature r2 (#272) (@behinger)
• CompatHelper: bump compat for Interpolations to 0.16, (keep existing compat) (#273) (@github-actions[bot])
• [AUTO] pre-commit update (#274) (@github-actions[bot])
• docs: add LeonvonHaugwitz as a contributor for bug (#278) (@allcontributors[bot])

Closed issues:

• differentiate between sparse and non sparse basisfunctions (#11)
• MultiDocumenter.jl (#207)

Docs retrigger

v0.8.4+docs

v0.8.4

v0.8.4

Unfold v0.8.4

Diff since v0.8.3

• new unified docs landing page

Merged pull requests:

• [AUTO] pre-commit update (#255) (@github-actions[bot])
• Unify landingpage (#256) (@behinger)

v0.8.3

Unfold v0.8.3

Diff since v0.8.2

Reduced compat with bsplinekit to 0.17 because it exports a fit function, leading to semi-breaking changes.

v0.8.2

Unfold v0.8.2

Diff since v0.8.1

• Update docstring of condense function
• Updated some tutorials + better looking docs

Merged pull requests:

• Update condense.jl (#245) (@ReneSkukies)
• [AUTO] pre-commit update (#246) (@github-actions[bot])
• CompatHelper: bump compat for BSplineKit to 0.18, (keep existing compat) (#248) (@github-actions[bot])
• CompatHelper: bump compat for BSplineKit in [weakdeps] to 0.18, (keep existing compat) (#249) (@github-actions[bot])
• removed Unfold from test environment... (#250) (@behinger)
• [AUTO] pre-commit update (#251) (@github-actions[bot])
• fix: BSPlineKit 0.18 is not breaking, but now exports fit, which runs into a conflict (#252) (@behinger)

v0.8.1

Unfold v0.8.1

Diff since v0.8.0

Bugfix: residuals were incorrectly calculated in the case the data is longer than the model

Merged pull requests:

• Update predict.jl (#244) (@behinger)

v0.8.0

Unfold v0.8.0

Diff since v0.7.9

breaking: Instead of having MixedModels as a PackageExtension, we will soon have the UnfoldMixedModels.jl package (after 3 days of registry period). This is necessary to export the UnfoldLinearMixedModels type, which is not exprtable from a PackageExtension. This split further allows for better code modularity.

That is, users now have to do: using UnfoldMixedModels rather than using Unfold, MixedModels

Merged pull requests:

• CompatHelper: bump compat for DSP to 0.8, (keep existing compat) (#237) (@github-actions[bot])
• [AUTO] pre-commit update (#238) (@github-actions[bot])
• predict docs typo fix (#240) (@Till223)
• docs: add Till223 as a contributor for doc, and bug (#241) (@allcontributors[bot])
• remove @show from epoch.jl (#242) (@behinger)
• (re)moved MixedModelsExt traces (#243) (@behinger)

Closed issues:

• epoch() contains an @show (#239)

v0.7.9

Unfold v0.7.9

Diff since v0.7.8

Relaxed some compatability versions

Merged pull requests:

• relax dependencies a bit (#236) (@behinger)

v0.7.8

Unfold v0.7.8

Diff since v0.7.7

Feature:

• Scaled FIR basisfunction ala Cameron Hassall et al. 2022 implemented
• Scaled FIR basisfunction ala Blockdesign [0 0 0 1 1 1 1 1 0 0] implemented
• New tutorial for those

Backend

• Moved all actions to BestieTemplates.jl, including online Formatter action to pre-commit

Merged pull requests:

• FIR with duration (#89) (@behinger)
• apply BestieTemplate - :S (#229) (@behinger)
• Bump codecov/codecov-action from 4 to 5 (#231) (@dependabot[bot])
• Bump actions/upload-artifact from 2 to 4 (#232) (@dependabot[bot])
• Bump actions/checkout from 2 to 4 (#233) (@dependabot[bot])
• Bump peter-evans/create-or-update-comment from 3 to 4 (#234) (@dependabot[bot])
• Bump peter-evans/find-comment from 2 to 3 (#235) (@dependabot[bot])

v0.7.7

Unfold v0.7.7

Diff since v0.7.6

• new structured backbone for the solver. Added ~6-7 new solvers. Split up the solver into prepare & solve functions that can be chained / modified easily. Added a reference document for exactly this.
• major bug: likelihoodratiotest was calculating wrong results (it was calculating a wrong likelihood). This lead to a breaking change in API, where now the data need to be provided as well.
• Bumped JLD to 0.5 - this means one cannot save files now and load it in older Unfold versions, but old unfold version files can still be loaded
• several small docstring fixes
• new CUDAextension, allowing to provide CuArray to automatically choose a better solver (still needs to be tested more though)
• fit now has an argument that can be set fit=false to not actually run the ´fit!` function, to do it later
• benchmarks now available comparing ~7 solver types with and without GPU, some with and without Float32. Improvements of up to 10x of the SOA-GPU solver were achieved - fit a large model with 128 channels in wopping 8 seconds! Further tests are needed though to describe the accuracy drop that is achieved by solving X'Xb = X'y instead of Xb = y directly.

Merged pull requests:

• predict tutorial (#219) (@behinger)
• better fit docs (#221) (@behinger)
• docs: add maxvanmigem as a contributor for bug (#222) (@allcontributors[bot])
• update to JLD 0.5 (#224) (@behinger)
• docs: add ReneSkukies as a contributor for code, and ideas (#226) (@allcontributors[bot])
• new solver system (#227) (@behinger)
• better benchmark structure (#228) (@behinger)

Closed issues:

• documentation open issues (#195)
• LM overlap correction tutorial still uses old Unfold syntax (#199)
• Inconsistency in predict( ) input; better docstring (#216)
• Julia 1.11 crash (#223)
• slight differences between MixedModels.jl and Unfold.jl (#225)