Search results

Change of default values for some options - major version change?

enhancement

Status: Open.

#609 In torognes/vsearch;

· torognes opened on Oct 22, 2025

· 

vsearch 3.0

inclusion of DADA2 EM algorithm for sequence correction

enhancement

Status: Open.

#607 In torognes/vsearch;

· killidude opened on Sep 13, 2025

Available RAM and CPU cores reported by arch_get_memtotal() and arch_get_cores() may be misleading.

Documentation

enhancement

Status: Open.

#584 In torognes/vsearch;

· ndusek opened on Dec 11, 2024

Very slow processing sintax vsearch/2.28.1

Documentation

enhancement

Status: Open.

#570 In torognes/vsearch;

· msalamon2 opened on Aug 8, 2024

interpretation of --maxaccepts vsearch

Documentation

question

Status: Open.

#569 In torognes/vsearch;

· Robvh-git opened on Aug 5, 2024

--fastq_ascii and --fastq_qmax must be no more than 126

question

Status: Open.

#564 In torognes/vsearch;

· goodcouscous opened on Jun 14, 2024

unexpected behaviour - v 2.28 sintax chooses first sequence when not classifiable

Status: Open.

#563 In torognes/vsearch;

· givdieri opened on May 17, 2024

missing userfields options

enhancement

Status: Open.

#548 In torognes/vsearch;

· frederic-mahe opened on Dec 6, 2023

Option to output the reason why merging failed

enhancement

Status: Open.

#524 In torognes/vsearch;

· torognes opened on May 31, 2023

Why FASTQ quality value above qmax is treated as Fatal error?

enhancement

question

Status: Open.

#522 In torognes/vsearch;

· tao-bioinfo opened on May 21, 2023

Chimera detection --uchime_ref unexpected behaviour

enhancement

Status: Open.

#504 In torognes/vsearch;

· nvucic opened on Jan 24, 2023

Allow FASTQ files as input to more commands

enhancement

Status: Open.

#496 In torognes/vsearch;

· torognes opened on Sep 12, 2022