🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

Bring your single-cell data to life

A tool that allows to get UMI counts from a single cell protein assay

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

The IDK (Industrial Development Kit) library!

🏃 A Monorepo of projects reaching towards EPIC proportions, maintained by one person.

Standalone tool and library allowing to work with barcoded linked-reads

Collection of tools and resources for linked-reads

🕺 GUI picker thing for emoji power users

i must fight to stay sane

shiny app for single cell RNAseq experiments, with plug-in like structure for flexible integration of tools and visualizations.

Spoiler alert: Scrum Masters and managers love 10x code Ninja developers!

A recreation of Windows 10X, in your browser.

Laravel API boilerplate for 10-x developers!

CWL toolkit for single-cell sequencing data analysis

R package: {rfca} Random forest-based cell annotation methods for scRNAseq analysis. {rfca} contains methods which identifies cell types using machine learning trained on a diversity of cell types, without the need for a labelled training dataset. It also allows you to train your own cell prediction models with your own labels (cell type, subtyp…

GLTF loader plugin for Lumix Engine

10x USWDS Advanced Form Controls (was USWDS Forms Experience)