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1. jetstream jetstream Public

   Workflow management system written as a pure Python package and command-line utility. It supports complex workflows modeled as directed- acyclic graphs (DAGs), and execution on batch schedulers

   Python 15 1

2. phoenix phoenix Public

   Jetstream compatible workflow template supporting comprehensive analysis of human sequencing data against GRCh38

   EJS 17 5

3. jetstream_resources jetstream_resources Public

   Collection of scripts and README files tracking the source and generation of reference genomes and annotation files

   Shell 3 1

4. lumosVar2 lumosVar2 Public

   Calls somatic SNVs, indels, and allelic copy number jointly across multiple samples from the same patient. These can be standard tumor/normal pair, longitudinal samples, primary/met, etc. Can also …

   MATLAB 10 1