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SPLASH 2.3.0
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@marekkokot marekkokot released this 12 Jan 18:57
· 44 commits to master since this release
v2.3.0
e126267
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Learn about vigilant mode.

Changelog:

  • new parameter in splash allowing to choose n top target_entropy
  • new software dsv_manip allows simple manipulation of delimiter-separated files (tsv, csv, etc.). Currently, it allows sorting the file by a given column and selecting only n records with the highest/lowest value of a given column.
  • the number of threads for stages is now, by default, auto-configured but may still be overridden using appropriate parameters
  • by default splash will also select 10k top target entropy anchors
  • compactors: finding all anchors' occurrences in a read, not just the first one (--all_anchors switch),
  • satc_merge: 2-mer and 3-mer sequence entropy for anchor and most frequent targets.
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