Repositories list

• LLM_NER

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Aug 15, 2025Aug 15, 2025

• psi-co-mAFiA

  Public
  Python

  •0•0•0•0•Updated Aug 11, 2025Aug 11, 2025

• QutRNA

  Public
  R

  •

  MIT License

  •1•3•1•0•Updated Aug 5, 2025Aug 5, 2025

• Scintillator

  Public
  Python

  •0•0•5•0•Updated Aug 5, 2025Aug 5, 2025

• JACUSA2

  Public
  New version of JACUSA -> 2.0

  Java

  •

  GNU General Public License v3.0

  •3•27•31•3•Updated Aug 3, 2025Aug 3, 2025

• m6A_psi_interaction

  Public
  Python

  •0•0•1•0•Updated Aug 2, 2025Aug 2, 2025

• LINDAPlus

  Public
  HTML

  •0•0•0•0•Updated Jul 31, 2025Jul 31, 2025

• AppleDashboard

  Public
  Dashboard for analysis of Apple Watch data with interactive graphics.

  Python

  •

  MIT License

  •5•13•0•0•Updated Jul 28, 2025Jul 28, 2025

• biolm_utils

  Public
  Python

  •0•0•0•0•Updated Jul 16, 2025Jul 16, 2025

• rna_protein_xlnet

  Public
  Python

  •0•0•1•0•Updated Jul 16, 2025Jul 16, 2025

• rna_saluki_cnn

  Public
  Python

  •0•0•2•0•Updated Jul 16, 2025Jul 16, 2025

• OSM_Location_data_collection

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Jul 14, 2025Jul 14, 2025

• mAFiA

  Public
  Python

  •1•5•5•1•Updated Jul 12, 2025Jul 12, 2025

• rp-bp

  Public
  Rp-Bp is a Bayesian approach to predict, at base-pair resolution, ribosome occupancy and translation.

  Python

  •

  MIT License

  •5•7•5•1•Updated Jul 7, 2025Jul 7, 2025

• pbiotools

  Public
  Bioinformatics utilities

  Python

  •

  MIT License

  •1•0•0•1•Updated Jul 7, 2025Jul 7, 2025

• scimodom

  Public
  Sci- ModoM: A quantitative database of transcriptome-wide high-throughput RNA modification sites

  Python

  •

  GNU Affero General Public License v3.0

  •0•0•37•0•Updated Jul 3, 2025Jul 3, 2025

• medication_information_extraction_using_llms

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Jun 28, 2025Jun 28, 2025

• ecg_processing

  Public
  Python

  •0•0•0•0•Updated Jun 25, 2025Jun 25, 2025

• ASyH

  Public
  The Anonymous Synthesizer for Health Data

  gaussian-mixture-modelshealth-datavariational-autoencoder+ 6anonymizationsynthetic-datasynthetic-dataset-generationml-pipelinectgansynthetic-data-vault

  Python

  •

  MIT License

  •1•5•2•1•Updated Jun 20, 2025Jun 20, 2025

• medex

  Public
  Intuitive Graphical User Interface for Medical Data Exploration

  Python

  •

  MIT License

  •3•4•4•3•Updated Jun 20, 2025Jun 20, 2025

• 4sU

  Public
  Python

  •0•0•0•0•Updated Jun 5, 2025Jun 5, 2025

• euf-specs

  Public
  Specifications of epitranscriptome unified file formats (bedRMod)

  TeX

  •1•0•1•0•Updated May 22, 2025May 22, 2025

• bioinformatics-lectures

  Public
  Jupyter Notebook

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated May 13, 2025May 13, 2025

• ecg_data_synthesis

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated May 7, 2025May 7, 2025

• LLM_Relations

  Public
  R

  •0•2•0•0•Updated Apr 17, 2025Apr 17, 2025

• ecg_classification

  Public
  Python

  •0•0•0•0•Updated Apr 14, 2025Apr 14, 2025

• gEAR

  Public
  The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.

  Jupyter Notebook

  •

  GNU Affero General Public License v3.0

  •5•1•6•0•Updated Mar 27, 2025Mar 27, 2025

• gear_lamp

  Public
  Ansible Playbook install for the gEAR repository (DHART) and LAMP stack

  GNU General Public License v3.0

  •1•1•0•0•Updated Mar 25, 2025Mar 25, 2025

• LINDA

  Public
  HTML

  •0•1•0•0•Updated Mar 20, 2025Mar 20, 2025

• single-cell-nanopore

  Public
  Workflow for Nanopore Sequencing of 10x single cell libraries

  C++

  •

  GNU General Public License v3.0

  •2•19•2•0•Updated Mar 20, 2025Mar 20, 2025