The bedRMod format formalizes the ENCODE bedMethyl format to represent RNA modifications. It is compatible with the BED (Browser Extensible Data) format, and most of the specifications are directly derived from the offical BED specifications, available under the SAM/BAM and related specifications.
This repository provides the official specifications for the header and data sections of the bedRMod format. It is structured as the official hts-specs repository, and some of its content is also taken from that repository.
To request improvements, changes in specifications, or to report issues, use this repository. Consult the list of maintainers to contact them directly.
bedRModv2.tex is the official specification for the bedRMod format.