Add CiLISI as new metric component #57
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Describe your changes
Add
metrics/cilisinew metric component.CiLISI measures batch mixing in a cell type-aware manner by computing iLISI within each cell type and normalizing the scores between 0 and 1. Unlike iLISI, ciLISI preserves sensitivity to biological variance and avoids favoring overcorrected datasets with removed cell type signals.
We propose adding this metric to substitute iLISI.
More information at:
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Proposed changes are described in the CHANGELOG.md
CI Tests succeed and look good!