✨ feat (cli): add -with-seqera as a cli alias for -with-tower

Signed-off-by: Ken Brewer <kenibrewer@users.noreply.github.com>

Author: kenibrewer

docs/reference/cli.md

@@ -631,9 +631,9 @@ The `kuberun` command supports the following options from [`run`](#run):
 - `-with-dag`
 - `-N, -with-notification`
 - `-with-report`
+- `-with-seqera`
 - `-with-spack`
 - `-with-timeline`
-- `-with-tower`
 - `-with-trace`
 - `-with-wave`
 - `-with-weblog`
@@ -1194,6 +1194,9 @@ The `run` command is used to execute a local pipeline script or remote pipeline
 `-with-report` (`report-<timestamp>.html`)
 : Create workflow execution HTML report.
 
+`-with-seqera`, `-with-tower` (`https://api.cloud.seqera.io`)
+: Monitor workflow execution with [Seqera Platform](https://seqera.io/) (formerly Tower Cloud).
+
 `-with-singularity`
 : Enable process execution in a Singularity container.
 
@@ -1203,9 +1206,6 @@ The `run` command is used to execute a local pipeline script or remote pipeline
 `-with-timeline` (`timeline-<timestamp>.html`)
 : Create workflow execution timeline.
 
-`-with-tower` (`https://api.cloud.seqera.io`)
-: Monitor workflow execution with [Seqera Platform](https://seqera.io/) (formerly Tower Cloud).
-
 `-with-trace` (`trace-<timestamp>.txt`)
 : Create workflow execution trace file.
 
@@ -1271,7 +1271,7 @@ The `run` command is used to execute a local pipeline script or remote pipeline
 - Execute a pipeline with integrated monitoring in [Seqera Platform](https://seqera.io).
 
   ```console
-  $ nextflow run nextflow-io/hello -with-tower
+  $ nextflow run nextflow-io/hello -with-seqera
   ```
 
 - Execute a pipeline with a custom parameters file (YAML or JSON).

modules/nextflow/src/main/groovy/nextflow/cli/CmdRun.groovy

@@ -167,7 +167,7 @@ class CmdRun extends CmdBase implements HubOptions {
         launcher.options.ansiLog = value
     }
 
-    @Parameter(names = ['-with-tower'], description = 'Monitor workflow execution with Seqera Platform (formerly Tower Cloud)')
+    @Parameter(names = ['-with-tower', '-with-seqera'], description = 'Monitor workflow execution with Seqera Platform (formerly Tower Cloud)')
     String withTower
 
     @Parameter(names = ['-with-wave'], hidden = true)

modules/nextflow/src/main/groovy/nextflow/cli/Launcher.groovy

@@ -293,7 +293,7 @@ class Launcher {
                 normalized << '-'
             }
 
-            else if( current == '-with-tower' && (i==args.size() || args[i].startsWith('-'))) {
+            else if( (current == '-with-tower' || current == '-with-seqera') && (i==args.size() || args[i].startsWith('-'))) {
                 normalized << '-'
             }
 

modules/nextflow/src/test/groovy/nextflow/cli/LauncherTest.groovy

@@ -195,6 +195,10 @@ class LauncherTest extends Specification {
         launcher.normalizeArgs('run','-with-tower', '-x') == ['run', '-with-tower', '-', '-x']
         launcher.normalizeArgs('run','-with-tower', 'foo.com') == ['run', '-with-tower','foo.com']
 
+        launcher.normalizeArgs('run','-with-seqera') == ['run', '-with-seqera', '-']
+        launcher.normalizeArgs('run','-with-seqera', '-x') == ['run', '-with-seqera', '-', '-x']
+        launcher.normalizeArgs('run','-with-seqera', 'foo.com') == ['run', '-with-seqera','foo.com']
+
         launcher.normalizeArgs('run','-with-wave') == ['run', '-with-wave', '-']
         launcher.normalizeArgs('run','-with-wave', '-x') == ['run', '-with-wave', '-', '-x']
         launcher.normalizeArgs('run','-with-wave', 'foo.com') == ['run', '-with-wave','foo.com']