visualising LeafCutter sQTLs by genotype

This is a fork of Jack Humphrey's sQTL visualization LeafCutter tweak.

Name		Name	Last commit message	Last commit date
Latest commit History 18 Commits
.Rhistory		.Rhistory
Ne-sQTL_perind_numers.counts.gz		Ne-sQTL_perind_numers.counts.gz
README.md		README.md
all_data.Rdata		all_data.Rdata
gencode_hg19_all_exons.txt.gz		gencode_hg19_all_exons.txt.gz
gencode_hg19_all_introns.bed.gz		gencode_hg19_all_introns.bed.gz
gencode_hg19_fiveprime.bed.gz		gencode_hg19_fiveprime.bed.gz
gencode_hg19_threeprime.bed.gz		gencode_hg19_threeprime.bed.gz
make_sQTL_box_plot.R		make_sQTL_box_plot.R
make_sQTL_cluster_plot.R		make_sQTL_cluster_plot.R
make_sQTL_gene_plot.R		make_sQTL_gene_plot.R
permutations_full.txt.gz		permutations_full.txt.gz
sQTL_prepare.R		sQTL_prepare.R
sQTL_results.Rdata		sQTL_results.Rdata
server.R		server.R
sig_snps.txt		sig_snps.txt
tag_snps.neand.EUR.bed		tag_snps.neand.EUR.bed
tissue_table.txt		tissue_table.txt
ui.R		ui.R
used_samples.txt		used_samples.txt

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