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Pull requests: galaxyproject/tools-iuc

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Pull requests list

diamond: fix linter errors, allow gz input
#7446 opened Nov 8, 2025 by bernt-matthias Loading…
3 of 5 tasks
Update meryl wrapper and remove kmer limit
#7445 opened Nov 7, 2025 by Delphine-L Loading…
5 tasks
2
Add amas(1.0) tool
#7443 opened Nov 6, 2025 by jchchiu Loading…
3 of 5 tasks
13
Updating tools/biapy from version 3.6.5 to 3.6.6
#7427 opened Nov 3, 2025 by gxydevbot Loading…
1
Add fastq-groupmerge
#7424 opened Oct 31, 2025 by SantaMcCloud Loading…
3 of 5 tasks
37
MetaPhlAn - Update to 4.2.4
#7423 opened Oct 31, 2025 by RZ9082 Loading…
3 of 5 tasks
7
Add kMetaShot and DM for kMetaShot
#7421 opened Oct 30, 2025 by SantaMcCloud Loading…
3 of 5 tasks
32
Fastq-dl - Capture exit code in for loop
#7420 opened Oct 30, 2025 by RZ9082 Loading…
3 of 5 tasks
Fix detection of tables in pandas
#7419 opened Oct 30, 2025 by bgruening Loading…
2
Update ampvis2
#7418 opened Oct 30, 2025 by bernt-matthias • Draft
3 of 5 tasks
1
Add CellTypist tool for automated celltype annotation
#7415 opened Oct 30, 2025 by pavanvidem • Draft
3 of 5 tasks
6
Add Samtools Consensus
#7407 opened Oct 29, 2025 by Smkingsize Loading…
3 tasks done
13
data_manager support for ncbi-amrfinderplus 4.0.x databases
#7404 opened Oct 28, 2025 by PovilasMat Loading…
3 of 5 tasks
2
Updating tools/mirmachine from version 0.3.0.1 to 0.3.0.2
#7394 opened Oct 27, 2025 by gxydevbot Loading…
minimap2 update to 2.30
#7388 opened Oct 25, 2025 by bgruening Loading…
3 of 5 tasks
3
New tool addition: Beast2 wrappers
#7387 opened Oct 24, 2025 by SaimMomin12 • Draft
3 of 5 tasks
2
[WIP] add alpha version of pangenie
#7380 opened Oct 23, 2025 by bgruening • Draft
Updating tools/bigscape from version 1.1.9 to 2.0.0
#7372 opened Oct 20, 2025 by gxydevbot Loading…
1
[WIP] odgi update + new tools
#7371 opened Oct 19, 2025 by bgruening • Draft
added otak_tool
#7367 opened Oct 18, 2025 by Deeptivarshney Loading…
2 of 4 tasks
Add memory flag to metaSPAdes for better RAM handeling
#7363 opened Oct 15, 2025 by SantaMcCloud Loading…
3 of 5 tasks
17
Update Semibin 2.0.2 to 2.2.0
#7347 opened Oct 8, 2025 by SantaMcCloud Loading…
3 of 5 tasks
15
Update coreprofiler db
#7341 opened Oct 6, 2025 by hugolefeuvre Loading…
3 of 5 tasks
15
Updating tools/trycycler from version 0.5.5 to 0.5.6
#7336 opened Oct 6, 2025 by gxydevbot Loading…
1
Updating tools/rp2paths from version 2.0.0 to 2.1.3
#7333 opened Oct 6, 2025 by gxydevbot Loading…
2
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