Update coreprofiler db

[hugolefeuvre]

FOR CONTRIBUTOR:

• I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
• License permits unrestricted use (educational + commercial)
• This PR adds a new tool or tool collection
• This PR updates an existing tool or tool collection
• This PR does something else (explain below)

Closes: #7331

[hugolefeuvre]

This PR close this one : #7331

[hugolefeuvre]

Hi @SaimMomin12, I see that you rerun test, any idea why it fails ? The error doesn't seem to come from the tool. Is it a wrapper or a galaxy error ?

[SaimMomin12]

Hi @SaimMomin12, I see that you rerun test, any idea why it fails ? The error doesn't seem to come from the tool. Is it a wrapper or a galaxy error ?

No, unfortunately we are experiencing some CI issues lately. Nonetheless, we re-trigger the failed workflow manually :)

[SaimMomin12]

I see the test timed out after 1800.25 seconds and failed. Let me loop in @bernt-matthias

[bernt-matthias]

1800s is the max runtime of a test allowed in our CI. any way to speed things up?

[hugolefeuvre]

1800s is the max runtime of a test allowed in our CI. any way to speed things up?

I'm not sure it's possible to speed things up. The three tests involve three different databases, and the last one, which concerns Enterobase, only has two possible values, and the one that was tested is the smallest. Maybe we can delete this one? The parameters used are the same as for the other databases.

[hugolefeuvre]

Currently, we have no way of speeding things up, so we can suggest removing this test, or perhaps it is possible to extend run time for CI ?

[bernt-matthias]

Hrm. Don't know how to continue. Maybe mock a test?

[hugolefeuvre]

Hrm. Don't know how to continue. Maybe mock a test?

I remove the test that fail because of time limit, I use bash variables for token and secrets parameters (but I'm not sure I wrote or use them well), and I added a conditional to distinguish token and non token generated databases.