Enabled Editing of the Description Attribute

docs/deployment/customization/Caching.md

@@ -19,6 +19,33 @@ The default configuration initializes two separate caches; however, you may wish
 datatypes. Please see the [Redis](#redis) and [Ehcache](#ehcache) sections to see how to set up a new cache in whichever
 system you are using.
 
+public abstract class AbstractCacheConfig extends CachingConfigurerSupport {
+
+    @Value("${cache.name:cbioportal}")
+    private String appName;
+
+    protected abstract CacheManager cacheManager();
+
+    /**
+     * Creates a cache resolver for a given cache name, prepending the application name
+     * @param cacheName The base cache name
+     * @return A named cache resolver for the specified cache
+     */
+    protected CacheResolver createCacheResolver(String cacheName) {
+        return new NamedCacheResolver(cacheManager(), appName + cacheName);
+    }
+
+    @Bean
+    public CacheResolver generalRepositoryCacheResolver() {
+        return createCacheResolver("GeneralRepositoryCache");
+    }
+
+    @Bean
+    public CacheResolver clinicalDataCacheResolver() {
+        return createCacheResolver("ClinicalDataCache");
+    }
+}
+
 ### Redis
 
 Cache initialization is handled inside

src/main/java/org/cbioportal/legacy/web/PublicVirtualStudiesController.java

@@ -64,10 +64,11 @@ public ResponseEntity<Void> publishVirtualStudy(
         @PathVariable String id,
         @RequestHeader(value = "X-PUBLISHER-API-KEY") String providedPublisherApiKey,
         @RequestParam(required = false) String typeOfCancerId,
-        @RequestParam(required = false) String pmid
+        @RequestParam(required = false) String pmid,
+        @RequestParam(required = false) String description
     ) {
         ensureProvidedPublisherApiKeyCorrect(providedPublisherApiKey);
-        publishVirtualStudy(id, typeOfCancerId, pmid);
+        publishVirtualStudy(id, typeOfCancerId, pmid, description);
         return ResponseEntity.ok().build();
     }
 
@@ -87,11 +88,12 @@ public ResponseEntity<Void> unPublishVirtualStudy(
      * @param id - id of public virtual study to publish
      * @param typeOfCancerId - if specified (not null) update type of cancer of published virtual study
      * @param pmid  - if specified (not null) update PubMed ID of published virtual study
+     * @param description - if specified (not null) update description of published virtual study
      */
-    private void publishVirtualStudy(String id, String typeOfCancerId, String pmid) {
+    private void publishVirtualStudy(String id, String typeOfCancerId, String pmid, String description) {
         VirtualStudy virtualStudyDataToPublish = sessionServiceRequestHandler.getVirtualStudyById(id);
         VirtualStudyData virtualStudyData = virtualStudyDataToPublish.getData();
-        updateStudyMetadataFieldsIfSpecified(virtualStudyData, typeOfCancerId, pmid);
+        updateStudyMetadataFieldsIfSpecified(virtualStudyData, typeOfCancerId, pmid, description);
         virtualStudyData.setUsers(Set.of(ALL_USERS));
         sessionServiceRequestHandler.updateVirtualStudy(virtualStudyDataToPublish);
     }
@@ -121,7 +123,7 @@ private void ensureProvidedPublisherApiKeyCorrect(String providedPublisherApiKey
         }
     }
 
-    private void updateStudyMetadataFieldsIfSpecified(VirtualStudyData virtualStudyData, String typeOfCancerId, String pmid) {
+    private void updateStudyMetadataFieldsIfSpecified(VirtualStudyData virtualStudyData, String typeOfCancerId, String pmid, String description) {
         if (typeOfCancerId != null) {
             try {
                 cancerTypeService.getCancerType(typeOfCancerId);
@@ -134,6 +136,9 @@ private void updateStudyMetadataFieldsIfSpecified(VirtualStudyData virtualStudyD
         if (pmid != null) {
             virtualStudyData.setPmid(pmid);
         }
+        if (description != null) { 
+            virtualStudyData.setDescription(description);
+        }
     }
 
 }