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Pull requests: ProteoWizard/pwiz
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Skyline: Fix DdaSearchTest test in pass0 of nightly tests
#3652
opened Oct 21, 2025 by
brendanx67
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Allow sorting and grouping replicates on list lookup columns
#3642
opened Oct 13, 2025 by
nickshulman
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Updated msconvert and Skyline to handle Agilent neutral loss/gain scan data
#3634
opened Oct 10, 2025 by
bspratt
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Display tooltip over run-to-run alignment dropdown
#3608
opened Sep 23, 2025 by
nickshulman
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Create Replicate Abundance Box Plot
enhancement
New feature or request
#3603
opened Sep 17, 2025 by
eduardo-proteinms
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Draft
Fix bug Test / Connect button label bug in Remote Account edit dialog
#3577
opened Aug 7, 2025 by
ekoneil
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Fix bug where Skyline sometimes ignores the largest detected peak
#3410
opened Mar 26, 2025 by
nickshulman
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Reduce noise in SkylineNightly logs by watching for consecutive entries that differ only by anything that looks like a timestamp
#3369
opened Feb 13, 2025 by
bspratt
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Add support for pepxml files with search_engine = Percolator
#3278
opened Dec 13, 2024 by
poshul
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Add better exception handling in transition list input - in particular make the FileModifiedException more informative
#3202
opened Oct 18, 2024 by
bspratt
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More graceful handling of libraries containing nonsensical entries (e.g. water loss on molecule containing no oxygen atoms)
#3107
opened Aug 7, 2024 by
bspratt
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Skyline: Improve failure reporting in AssertEx.FileEquals
#3021
opened Jun 19, 2024 by
brendanx67
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