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Questions about processing single-end Hi-C reads from Ultima Genomics platform

Status: Open.

#189 In ENCODE-DCC/hic-pipeline;

· yihangs opened on Mar 30, 2024

Inconsistent statistic result

Status: Open.

#188 In ENCODE-DCC/hic-pipeline;

· hiiiyilingzhang opened on Feb 22, 2024

should we define "ligation_site_regex" if we choose enzyme "none"?

Status: Open.

#179 In ENCODE-DCC/hic-pipeline;

· shengqh opened on Feb 15, 2023

Can't call loops on SLURM

Status: Open.

#178 In ENCODE-DCC/hic-pipeline;

· wkc1986 opened on Feb 9, 2023

test hic fail on aws

Status: Open.

#152 In ENCODE-DCC/hic-pipeline;

· jarekgeneg opened on Mar 15, 2022