CellProfiling
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HPA-competition-solutions
HPA-competition-solutions PublicTeam original solutions for the Human Protein Atlas image classification competition
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SingleCellProteogenomics
SingleCellProteogenomics PublicCell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model
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HPA-competition
HPA-competition PublicHuman Protein Atlas image classification competition
Repositories
- HPA_Cilia_Study_Code Public
Code underpinning data processing and analysis in the preprint https://www.biorxiv.org/content/10.1101/2024.10.20.619273.
CellProfiling/HPA_Cilia_Study_Code’s past year of commit activity - Sp8-Lif_To_Memento Public
FIJI plugin that reads .lif files from the Sp8 confocal microscope and outputs a file system with pngs for Memento.
CellProfiling/Sp8-Lif_To_Memento’s past year of commit activity - SubCellPortable Public
This is a convenient code wrapper to run Lundberg lab SubCell model in inference with your own images
CellProfiling/SubCellPortable’s past year of commit activity - ell_code_template Public
CellProfiling/ell_code_template’s past year of commit activity - HPA_Convert_OPERA_To_LIMS-OMETIF Public
An ImageJ plugin to convert Opera Phenix image output folders to OME Tif format suitable for the HPA LIMS system or for Memento.
CellProfiling/HPA_Convert_OPERA_To_LIMS-OMETIF’s past year of commit activity
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