NeuronalCohesion

Analysis scripts for quantitation of neuronal/pharyngeal cohesion

Note this code depends on Starrynite repository code for acetree file loading code

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
ProximityGraphs		ProximityGraphs
Cone.m		Cone.m
README.md		README.md
SulstontoTerminal.m		SulstontoTerminal.m
allneurons.mat		allneurons.mat
allpharynx.mat		allpharynx.mat
buildNeighborMatrix.m		buildNeighborMatrix.m
computeaverages.m		computeaverages.m
computeaverages_recompute_correlationforall.m		computeaverages_recompute_correlationforall.m
cumulativeMotion.m		cumulativeMotion.m
distance_neuron_phayrnx_overtimeanalysis.m		distance_neuron_phayrnx_overtimeanalysis.m
findMatchingPharynx.m		findMatchingPharynx.m
getpercellmotionforembryo.m		getpercellmotionforembryo.m
graphplotting_neuronlist.m		graphplotting_neuronlist.m
iceCreamConePlot.m		iceCreamConePlot.m
internallyAlignNamedEmbryo.m		internallyAlignNamedEmbryo.m
neuron_cells.csv		neuron_cells.csv
pairings.csv		pairings.csv
parseCellsFromEmb.m		parseCellsFromEmb.m
partlist.mat		partlist.mat
pharynx_cells.csv		pharynx_cells.csv
pharynx_cells.txt		pharynx_cells.txt
quantitate_dvmotion_finalrevisions.m		quantitate_dvmotion_finalrevisions.m
quantitate_pharynx_neuron_motion_finalrevisions.m		quantitate_pharynx_neuron_motion_finalrevisions.m
recomputeCorrelation.m		recomputeCorrelation.m
screenforclosestpharynxtoneurons.m		screenforclosestpharynxtoneurons.m
terminalToSulston.m		terminalToSulston.m
testdriver_edited_mutant_limitedlist.m		testdriver_edited_mutant_limitedlist.m
testdriver_handnamed_mutant_wt_modified_bluetadpoleplot.m		testdriver_handnamed_mutant_wt_modified_bluetadpoleplot.m
testleader.m		testleader.m

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