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Reshape codec #10
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# reshape codec | ||||||
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Defines an `array -> array` codec that performs a reshaping operation. | ||||||
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Note that `reshape` always preserves the (logical) lexicographical order (i.e. C | ||||||
order traversal) of elements within an array, but may be combined with the | ||||||
`transpose` codec to both reorder and reshape an array. | ||||||
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## Codec name | ||||||
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The value of the `name` member in the codec object MUST be `reshape`. | ||||||
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## Configuration parameters | ||||||
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### `shape` | ||||||
An array specifying the size `B_shape[i]` of each dimension `i` of | ||||||
the *output* array `B` as a function of the shape `A_shape` of the input array | ||||||
`A`. Each element `shape[i]` must be one of: | ||||||
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- a positive integer `size`, specifying that `B_shape[i] := size`. | ||||||
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- an array of integers `input_dims`, specifying that: | ||||||
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``` | ||||||
B_shape[i] := prod(A_shape[input_dims]] | ||||||
```. | ||||||
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Specifying the corresponding `input_dims` rather than an explicit `size` is | ||||||
paticularly useful when using variable-size chunking. | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. particularly |
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- the special value `-1`, which must occur at most once, specifying that | ||||||
`B_shape[i]` is determined automatically in order to satisfy the | ||||||
invariant that `prod(B_shape) == prod(A_shape)`. | ||||||
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Implementations MUST return an error if the invariant | ||||||
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``` | ||||||
prod(B_shape) == prod(A_shape) | ||||||
``` | ||||||
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cannot be satisfied. | ||||||
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Additionally, when `shape[i]` is specified as an array of integers `input_dims`, | ||||||
implementations MUST return an error if the following constraints are not | ||||||
satisfied: | ||||||
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- the flattened list of input dimensions, over all elements of `shape`, must be | ||||||
in monotonically increasing order, i.e. `"shape": [[0, 1], 10, [3, 4]]` is | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. strictly monotonically |
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allowed but the following are NOT allowed: | ||||||
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- `"shape": [[1], [0]]` | ||||||
- `"shape": [[1, 0], 10, [3, 4]]` | ||||||
- `"shape": [[3, 4], 10, [0, 1]]` are not allowed. | ||||||
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This constraint serves to avoid confusing `shape` configurations that may | ||||||
(incorrectly) suggest a transpose, when in fact the `reshape` codec never | ||||||
performs a transpose. | ||||||
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- If `input_dims` specifies `k > 0` input dimensions: | ||||||
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`prod(B_shape[:i]) == prod(A_shape[input_dims[0]])` and | ||||||
`prod(B_shape[i+1:]) == prod(A_shape[input_dims[k-1]+1:])`. | ||||||
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This two constraints ensure that if the size of output dimension `i` is | ||||||
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Suggested change
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specified by `input_dims`, the coordinates in the input array along `input_dims` | ||||||
actually correspond to the raveled index along output dimension `i`. | ||||||
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## Example | ||||||
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For example, the array metadata below specifies that the compressor is the Zstd | ||||||
codec configured with a compression level of 1 and with the checksum stored: | ||||||
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There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. this description does not match the JSON |
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```json | ||||||
{ | ||||||
"chunk_grid": { | ||||||
"name": "regular", | ||||||
"configuration": { | ||||||
"chunk_shape": [100, 50, 64, 3] | ||||||
} | ||||||
}, | ||||||
"codecs": [ | ||||||
{ | ||||||
"name": "reshape", | ||||||
"configuration": { | ||||||
"shape": [[0, 1], [2], 3] | ||||||
} | ||||||
}, | ||||||
{ | ||||||
"name": "bytes" | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. It'd be good to demo high-dimensional |
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"configuration": {"endian": "little"} | ||||||
} | ||||||
] | ||||||
} | ||||||
``` | ||||||
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## Format and algorithm | ||||||
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This is an `array -> array` codec. | ||||||
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The dimensionality of the output array `B` is equal to the length of the `shape` | ||||||
configuration parameter, and the output shape `B_shape` is determined as | ||||||
specified above. | ||||||
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As this codec does NOT alter the lexicographical order of elements, the contents | ||||||
of the output array `B` is related to the contents of the input array `A` by: | ||||||
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Suggested change
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`ravel(B) == ravel(A)`. | ||||||
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Implementations should, when possible, construct a virtual view rather than copy | ||||||
the array. | ||||||
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## Change log | ||||||
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No changes yet. | ||||||
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## Current maintainers | ||||||
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* Jeremy Maitin-Shepard ([@jbms](https://github.com/jbms)), Google |
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{ | ||
"$schema": "https://json-schema.org/draft/2020-12/schema", | ||
"type": "object", | ||
"properties": { | ||
"name": { | ||
"const": "reshape" | ||
}, | ||
"configuration": { | ||
"type": "object", | ||
"properties": { | ||
"shape": { | ||
"type": "array", | ||
"items": { | ||
"oneOf": [ | ||
{"type": "integer", "minimum": -1}, | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. 0 is not a valid integer |
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{"type": "array", "items": {"type": "integer", "minimum": 0}} | ||
] | ||
} | ||
} | ||
}, | ||
"required": ["shape"], | ||
"additionalProperties": false | ||
} | ||
}, | ||
"required": ["name", "configuration"], | ||
"additionalProperties": false | ||
} |
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formatting issues here