Use uv with flit-core backend

.github/dependabot.yml

@@ -5,7 +5,7 @@
 
 version: 2
 updates:
-  - package-ecosystem: "pip" # See documentation for possible values
+  - package-ecosystem: "uv" # See documentation for possible values
     directory: "/" # Location of package manifests
     schedule:
       interval: "weekly"

.github/workflows/gh-pages.yml

@@ -11,7 +11,7 @@ jobs:
       - uses: actions/setup-python@v2
         with:
           python-version: 3.x
-
+      # TODO uv (uv sync --locked --no-dev --group docs)
       - run: pip install flit
       - run: flit install --only-deps --deps develop
       - run: mkdocs gh-deploy --force

.github/workflows/publish-package.yml

@@ -9,6 +9,8 @@ jobs:
     runs-on: ubuntu-latest
     steps:
     - uses: actions/checkout@v3
+
+      # TODO uv
     - name: Set up Python
       uses: actions/setup-python@v2
       with:

.github/workflows/run-codspeed-tests.yml

@@ -40,6 +40,7 @@ jobs:
       - name: Check out repository code
         uses: actions/checkout@v3
 
+      # TODO uv
       - name: Install dependencies
         run: |
           apt update

.github/workflows/run-linting-tests.yml

@@ -20,17 +20,34 @@ jobs:
 
     steps:
       - uses: actions/checkout@v3
-      - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+
+      - name: Install uv and set the python version
+        uses: astral-sh/setup-uv@v5
         with:
+          # It is considered best practice to pin to a specific uv version.
+          version: "0.7.13"
           python-version: ${{ matrix.python-version }}
-      - name: Install dependencies
-        run: |
-          python -m pip install --upgrade pip
-          pip install flit
-          flit install --deps develop --symlink
+
+      - name: Install the project
+        run: uv sync --locked --all-extras --dev
+
       - name: Check with mypy
-        run: |
-          mypy .
+        run: uv run mypy .
+
+#      - name: Set up Python ${{ matrix.python-version }}
+#        uses: actions/setup-python@v2
+#        with:
+#          python-version: ${{ matrix.python-version }}
+#
+#      - name: Install dependencies
+#        run: |
+#          python -m pip install --upgrade pip
+#          pip install flit
+#          flit install --deps develop --symlink
+#
+#      - name: Check with mypy
+#        run: |
+#          mypy .
+
       - name: Run remaining pre-commit hooks
         uses: pre-commit/action@v3.0.1

.github/workflows/run-unit-tests.yml

@@ -14,7 +14,7 @@ jobs:
         python-version: ['3.11', '3.12', '3.13']
         postgres-version: ['15', '16', '17']
       fail-fast: false
-    container: python:${{ matrix.python-version }}-slim
+    # container: python:${{ matrix.python-version }}-slim
     services:
       postgres:
         image: postgres:${{ matrix.postgres-version }}-alpine
@@ -38,28 +38,47 @@ jobs:
           --health-timeout 5s
           --health-retries 5
     steps:
-      # Downloads a copy of the code in your repository before running CI tests
       - name: Check out repository code
         uses: actions/checkout@v3
 
-      - name: Install dependencies
-        run: |
-          apt update
-          apt install curl git build-essential libpq-dev libffi-dev -y
-          python -m pip install --upgrade pip
-          pip install flit
-          flit install --deps develop --symlink
-          echo "GIT_COMMIT_HASH=\"test\"" > orchestrator/version.py
-        env:
-          FLIT_ROOT_INSTALL: 1
-      - name: Run Unit tests
-        run: CACHE_URI=redis://redis DATABASE_URI=postgresql://$POSTGRES_USER:$POSTGRES_PASSWORD@$POSTGRES_HOST/$POSTGRES_DB  pytest --cov-branch --cov=orchestrator --cov-report=xml --ignore=test --ignore=orchestrator/devtools --ignore=examples --ignore=docs --ignore=orchestrator/vendor
+      - name: Install uv and set the python version
+        uses: astral-sh/setup-uv@v5
+        with:
+          # It is considered best practice to pin to a specific uv version.
+          version: "0.7.13"
+          python-version: ${{ matrix.python-version }}
+
+      - name: Install the project
+        run: uv sync --locked --all-extras --dev
+
+      - name: Run tests
+        run: CACHE_URI=redis://redis DATABASE_URI=postgresql://$POSTGRES_USER:$POSTGRES_PASSWORD@$POSTGRES_HOST/$POSTGRES_DB uv run pytest --cov-branch --cov=orchestrator --cov-report=xml --ignore=test --ignore=orchestrator/devtools --ignore=examples --ignore=docs
         env:
           POSTGRES_DB: orchestrator-core-test
           POSTGRES_USER: nwa
           POSTGRES_PASSWORD: nwa
           POSTGRES_HOST: postgres
           ENVIRONMENT: TESTING
+
+#      - name: Install dependencies
+#        run: |
+#          apt update
+#          apt install curl git build-essential libpq-dev libffi-dev -y
+#          python -m pip install --upgrade pip
+#          pip install flit
+#          flit install --deps develop --symlink
+#          echo "GIT_COMMIT_HASH=\"test\"" > orchestrator/version.py
+#        env:
+#          FLIT_ROOT_INSTALL: 1
+
+#      - name: Run Unit tests
+#        run: CACHE_URI=redis://redis DATABASE_URI=postgresql://$POSTGRES_USER:$POSTGRES_PASSWORD@$POSTGRES_HOST/$POSTGRES_DB  pytest --cov-branch --cov=orchestrator --cov-report=xml --ignore=test --ignore=orchestrator/devtools --ignore=examples --ignore=docs --ignore=orchestrator/vendor
+#        env:
+#          POSTGRES_DB: orchestrator-core-test
+#          POSTGRES_USER: nwa
+#          POSTGRES_PASSWORD: nwa
+#          POSTGRES_HOST: postgres
+#          ENVIRONMENT: TESTING
       - name: "Upload coverage to Codecov"
         uses: codecov/codecov-action@v3
         with:

Dockerfile

@@ -5,6 +5,7 @@ RUN apt-get update \
     && apt-get install -y --no-install-recommends git build-essential \
     && rm -rf /var/lib/apt/lists/*
 COPY . .
+# TODO uv
 RUN pip install --upgrade pip --no-cache-dir
 RUN pip install build --no-cache-dir
 RUN python -m build --wheel --outdir dist

pyproject.toml

@@ -1,143 +1,142 @@
-# See: https://stackoverflow.com/questions/69711606/how-to-install-a-package-using-pip-in-editable-mode-with-pyproject-toml
-[build-system]
-build-backend = "flit_core.buildapi"
-requires = ["flit_core >=3.2,<4"]
-
 [project]
 name = "orchestrator-core"
-dynamic = ['version', 'description']
-author = "SURF"
-author-email = "automation-beheer@surf.nl"
-home-page = "https://github.com/workfloworchestrator/orchestrator-core"
+dynamic = ["version", "description"]
+readme = "README.md"
+license = "Apache-2.0"
+license-files = ["LICENSE"]
+authors = [
+    { name = "SURF", email = "automation-beheer@surf.nl" }
+]
+requires-python = ">=3.11,<3.14"
 classifiers = [
+    "Development Status :: 5 - Production/Stable",
+    "Environment :: Web Environment",
+    "Framework :: AsyncIO",
+    "Framework :: FastAPI",
+    "Intended Audience :: Developers",
     "Intended Audience :: Information Technology",
     "Intended Audience :: System Administrators",
+    "Intended Audience :: Telecommunications Industry",
     "Operating System :: OS Independent",
+    "Programming Language :: Python :: 3 :: Only",
     "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
     "Programming Language :: Python",
+    "Topic :: Internet :: WWW/HTTP :: HTTP Servers",
+    "Topic :: Internet :: WWW/HTTP",
     "Topic :: Internet",
     "Topic :: Software Development :: Libraries :: Application Frameworks",
     "Topic :: Software Development :: Libraries :: Python Modules",
     "Topic :: Software Development :: Libraries",
     "Topic :: Software Development",
     "Typing :: Typed",
-    "Development Status :: 5 - Production/Stable",
-    "Environment :: Web Environment",
-    "Framework :: AsyncIO",
-    "Framework :: FastAPI",
-    "Intended Audience :: Developers",
-    "Intended Audience :: Telecommunications Industry",
-    "License :: OSI Approved :: Apache Software License",
-    "Programming Language :: Python :: 3 :: Only",
-    "Programming Language :: Python :: 3.13",
-    "Programming Language :: Python :: 3.12",
-    "Programming Language :: Python :: 3.11",
-    "Topic :: Internet :: WWW/HTTP :: HTTP Servers",
-    "Topic :: Internet :: WWW/HTTP",
 ]
 dependencies = [
     "alembic==1.16.1",
     "anyio>=3.7.0",
     "click==8.*",
-    "deprecated",
     "deepmerge==2.0",
+    "deprecated>=1.2.18",
     "fastapi~=0.115.2",
     "fastapi-etag==0.4.0",
+    "itsdangerous>=2.2.0",
+    "jinja2==3.1.6",
     "more-itertools~=10.7.0",
-    "itsdangerous",
-    "Jinja2==3.1.6",
+    "nwa-stdlib~=1.9.0",
+    "oauth2-lib~=2.4.0",
     "orjson==3.10.18",
     "prometheus-client==0.22.0",
     "psycopg2-binary==2.9.10",
-    "pydantic[email]~=2.8.2",
+    "pydantic-forms>=1.4.0,<=2.1.0",
     "pydantic-settings~=2.9.1",
+    "pydantic[email]~=2.8.2",
     "python-dateutil==2.8.2",
     "python-rapidjson>=1.18,<1.21",
     "pytz==2025.2",
     "redis==5.1.1",
     "schedule==1.1.0",
     "semver==3.0.4",
     "sentry-sdk[fastapi]~=2.29.1",
-    "SQLAlchemy==2.0.41",
-    "SQLAlchemy-Utils==0.41.2",
-    "structlog",
+    "sqlalchemy==2.0.41",
+    "sqlalchemy-utils==0.41.2",
+    "strawberry-graphql>=0.246.2",
+    "structlog>=25.4.0",
+    "tabulate==0.9.0",
     "typer==0.15.4",
     "uvicorn[standard]~=0.34.0",
-    "nwa-stdlib~=1.9.0",
-    "oauth2-lib~=2.4.0",
-    "tabulate==0.9.0",
-    "strawberry-graphql>=0.246.2",
-    "pydantic-forms>=1.4.0, <=2.1.0",
 ]
 
-description-file = "README.md"
-requires-python = ">=3.11,<3.14"
-
 [project.urls]
-Documentation = "https://workfloworchestrator.org/orchestrator-core/"
+Documentation = "https://workfloworchestrator.org/orchestrator-core"
+Homepage = "https://workfloworchestrator.org/orchestrator-core"
 Source = "https://github.com/workfloworchestrator/orchestrator-core"
 
+# Published optional dependencies, or "extras"
 [project.optional-dependencies]
 celery = [
-    "celery~=5.5.1"
+    "celery~=5.5.1",
 ]
 
-test = [
-    "apache-license-check",
-    "black",
-    "blinker",
-    "deepdiff",
-    "dirty-equals",
-    "jsonref",
+# Local dependencies for development
+[dependency-groups]
+docs = [
+    "mkdocs>=1.6.1",
+    "mkdocs-embed-external-markdown>=3.0.2",
+    "mkdocs-include-markdown-plugin>=7.1.6",
+    "mkdocs-macros-plugin>=1.3.7",
+    "mkdocs-material[imaging]>=9.6.14",
+    "mkdocs-open-in-new-tab>=1.0.8",
+    "mkdocs-render-swagger-plugin>=0.1.2",
+    "mkdocstrings[python]>=0.29.1",
+]
+dev = [
+    "apache-license-check>=1.0.0",
+    "black>=25.1.0",
+    "blinker>=1.9.0",
+    "deepdiff>=8.5.0",
+    "dirty-equals>=0.9.0",
+    "jsonref>=1.1.0",
     "mypy==1.9",
-    "pyinstrument",
+    "mypy-extensions>=1.1.0",
+    "pre-commit>=4.2.0",
+    "pydocstyle>=6.3.0",
+    "pyinstrument>=5.0.2",
     "pytest==8.3.5",
     "pytest-asyncio==0.21.2",
-    "pytest-codspeed",
-    "pytest-cov",
-    "pytest-httpx",
-    "pytest-xdist",
-    "requests-mock",
-    "ruff",
-    "sqlalchemy[mypy]",
-    "urllib3-mock",
-    "types-Deprecated",
-    "types-Jinja2",
-    "types-aiofiles",
-    "types-certifi",
-    "types-click",
-    "types-itsdangerous",
-    "types-orjson",
-    "types-python-dateutil",
-    "types-pytz",
-    "types-redis",
-    "types-requests",
-    "types-setuptools",
-    "types-tabulate",
-    "types-toml",
-    "types-ujson",
-    "types-PyYAML",
-]
-doc = [
-    "mkdocs",
-    "mkdocs-material[imaging]",
-    "mkdocs-render-swagger-plugin",
-    "mkdocs-include-markdown-plugin",
-    "mkdocstrings[python]",
-    "mkdocs-open-in-new-tab",
-    "mkdocs-macros-plugin",
-    "mkdocs-embed-external-markdown"
-]
-dev = [
-    "toml",
-    "bumpversion",
-    "mypy_extensions",
-    "pre-commit",
-    "pydocstyle",
-    "python-dotenv",
-    "watchdog",
+    "pytest-codspeed>=3.2.0",
+    "pytest-cov>=6.2.1",
+    "pytest-httpx>=0.29.0",
+    "pytest-xdist>=3.7.0",
+    "requests-mock>=1.12.1",
+    "ruff>=0.12.0",
+    "sqlalchemy[mypy]>=2.0.41",
+    "toml>=0.10.2",
+    "types-aiofiles>=24.1.0.20250606",
+    "types-certifi>=2021.10.8.3",
+    "types-click>=7.1.8",
+    "types-deprecated>=1.2.15.20250304",
+    "types-itsdangerous>=1.1.6",
+    "types-jinja2>=2.11.9",
+    "types-orjson>=3.6.2",
+    "types-python-dateutil>=2.9.0.20250516",
+    "types-pytz>=2025.2.0.20250516",
+    "types-pyyaml>=6.0.12.20250516",
+    "types-redis>=4.6.0.20241004",
+    "types-requests>=2.32.4.20250611",
+    "types-setuptools>=80.9.0.20250529",
+    "types-tabulate>=0.9.0.20241207",
+    "types-toml>=0.10.8.20240310",
+    "types-ujson>=5.10.0.20250326",
+    "urllib3-mock>=0.3.3",
+    "watchdog>=6.0.0",
 ]
 
+[build-system]
+requires = ["flit_core>=3.2,<4"]
+build-backend = "flit_core.buildapi"
+
 [tool.flit.module]
 name = "orchestrator"