Spring 2025 updates

.github/workflows/docker.yml

@@ -1,7 +1,5 @@
 name: Build notebook
 on:
-  schedule:
-    - cron: '0 2 * * *'
   push:
   workflow_dispatch:
 

Dockerfile

@@ -1,7 +1,6 @@
-ARG BASE_CONTAINER=ghcr.io/ucsd-ets/datascience-notebook:2024.4-stable
-FROM $BASE_CONTAINER
+FROM ghcr.io/ucsd-ets/datascience-notebook:2024.4-stable
 
-LABEL maintainer="UC San Diego ITS/ETS <ets-consult@ucsd.edu>"
+LABEL maintainer="https://github.com/ucsd-ets/spatial-datascience-notebook"
 
 USER root
 
@@ -17,6 +16,27 @@ RUN apt update -y && \
 
 RUN jupyter labextension install @dafeliton/jupyterlab-notebookparams
 
+### BEGIN censusdis
+ARG ENVNAME=censusdis
+ARG PYVER=3.11
+RUN mamba create --yes -p "${CONDA_DIR}/envs/${ENVNAME}" \
+    python=${PYVER} \
+    ipykernel \
+    jupyterlab && \
+    mamba clean --all -f -y
+
+RUN "${CONDA_DIR}/envs/${ENVNAME}/bin/python" -m ipykernel install --prefix /opt/conda --name="${ENVNAME}" && \
+    fix-permissions "${CONDA_DIR}" && \
+    fix-permissions "/home/${NB_USER}"
+
+RUN "${CONDA_DIR}/envs/${ENVNAME}/bin/pip" install --no-cache-dir \
+    censusdis \
+    'numpy==1.26.4' \
+    folium \
+    matplotlib \
+    mapclassify    
+### END censusdis
+
 # Install geospatial packages first
 RUN pip uninstall pillow fiona -y && \
     pip install -r ~/requirements.txt && \
@@ -36,9 +56,11 @@ RUN mamba install -c esri arcgis arcgis-mapping -y && \
 
 RUN pip install --upgrade pip setuptools wheel
 RUN pip install --upgrade nbconvert
-RUN pip install numpy==1.26.4 pygris shap
 
-# RUN pip install "numpy<2"
+RUN mamba install --yes 'py-xgboost' && \
+    mamba clean --all -f -y && \
+    fix-permissions "${CONDA_DIR}" && \
+    fix-permissions "/home/${NB_USER}"
 
 USER $NB_UID
 

requirements.txt

@@ -1,18 +1,18 @@
 pillow
 pyproj
-openpyxl 
-cenpy 
-python-Levenshtein 
-geopy 
+openpyxl
+cenpy
+python-Levenshtein
+geopy
 ipyleaflet
 keplergl
-mesa-geo 
-mesa 
-matplotlib 
+mesa-geo
+mesa
+matplotlib
 shapely
 pyshp
 pandas
-censusdata 
+censusdata
 graphviz
 geopandas
 cartopy