🐚 Collect and classify species of organisms.
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Updated
Sep 6, 2025 - TypeScript
🐚 Collect and classify species of organisms.
A Python package for efficiently aligning organismal taxonomic hierarchies using the Global Names Verifier
V. M. Gumerov, E. P. Andrianova, M. A. Matilla, Karen M. Page, Elizabet Monteagudo-Cascales, A. C. Dolphin, T. Krell, I. B. Zhulin (2022). Amino acid sensor conserved from bacteria to humans.
Generates images of the Tree of Life.
Source-specific tools for processing data (images) downloaded using distributed downloader and relies on MPI.
Code accompanying Somatic and germline mutational processes across the Tree of Life manuscript
My PhD thesis
MNHN-Tree-Tools a software for phylogenetic inference of millions of sequences
A high-performance C# Windows Forms application for visualizing the Tree of Life. This project demonstrates how to handle and render large hierarchical datasets (36,000+ nodes) efficiently by implementing a Quadtree for spatial indexing and custom radial layout algorithms.
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