Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.

This repository is for PyFWI, a Python package for seismic FWI and reservoir monitoring (time-lapse FWI)

This specialized program is used to align and stabilize solar eclipse time-lapse photos.

ESP32-CAM with webinterface as wireless camara or for taking timelapse with Webinterface

glimpse: Glacier Image Particle Sequencer

Deep learning-based instance segmentation tool for roundish objects in 2D and 2D+t data

An ImageJ plugin to quantify ciliary shape, length, and fluorescence.

Comprehensive pipeline for cell segmentation, tracking, and correlation analysis in time-lapse microscopy data. Utilizes deep learning models (Cellpose) for segmentation, with integrated refinement, tracking, and correlation analysis of dynamic cellular behaviors. Developed as part of a Master’s thesis project at KTH Royal Institute of Technology.

ImageJ macros to color stacks by time point and create a video where the projection builds up frame by frame.

napari plugin wrapping the Python package 'roidynamics' into an-easy-to-use interactive tool to analyze the dynamics of intensity in time-lapse microscopy images split into regions of specific geometries

Tool for semi-automatic tracking of migrating Dictyostelium cells from phase-contrast time-lapse image series

A benchmarked comparison of software packages for time-lapse image processing of monolayer bacterial population dynamics

Tools to classify, rename, and create maps for time lapse images.

ImageJ macros to analyse microglial cells in live or fixed tissue (Work-in-progress)

Computer vision tool for automated detection of arctic birds from time-lapse camera images

Java software for the analysis of image-based experiments of microprobes in suspension

Open-source algorithms for adaptive prospective optical gating in cardiac fluorescence microscopy.

A benchmarked comparison of software packages for time-lapse image processing of monolayer bacterial population dynamics