Processing NEON soil microbe marker gene sequence data into ASV tables.
Microbiome analysis pipeline with reference tutorial. This code was written in October 2024 to process rRNA marker gene data (16S and ITS) from rhizosphere soil samples.
The R-Shiny application for the Australian Soil Microbial 16S data browsing.
RhizoSolver classifies 16s rRNA sequences into the Rhizobiales genus.
neonMicrobe: Processing NEON soil microbe marker gene sequence data into ASV tables, duplicated from https://github.com/claraqin/neonMicrobe
Script for analyzing metabolic data
Here lies the adaption of Section 2 of Norgen's Soil DNA Isolation Kit. It was divided into 3 protocols, but feel free to wrap up (just pay attention to the number of tip racks). Recalibrate each time you are running the protocols (specially before the 3rdprotocol)
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