Open-source mechanistic model for ion exchange chromatography

An atlas of AAV genetic variants

I write here sometimes!

Compile lentiviral vector integration sites from sequencing pipeline

SSV-Conta quantify and characterize DNA contaminants from gene therapy vector sequenced by Illumina system.

SiRNA Seeker is a webapp built with Django in Python, which offers an intuitive interface for researchers to access and efficiently use a siRNA design algorithm.

This repository provides the source code, scripts, and usage instructions that serve as supplementary materials for the book Bioinformatics of Autoimmune Diseases by Hamid D. Ismail. It is designed to support reproducibility and hands-on learning by offering practical examples, data analysis pipelines, and tools discussed throughout the chapters.

A GLUE project for comparative genomic analysis of parvoviruses

Variational lineage inference from gene therapy assays with insertional mutagenesis and somatic mutations

O siRNA Seeker é um algoritmo que automatiza a identificação de siRNA,.

GEM | Gene Edit Machine: A machine learning-enhanced platform capable of classifying and optimizing gene variants for reduced pathogenicity. Featuring multi-database integration, research-backed feature engineering, optimized DNA and Protein-level analyses, and an intelligent guided + stochastic mutation algorithm "ReGen".

Gene editor cutting/repair kinetics curve fitting script