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exon-intron-structure

Here are 4 public repositories matching this topic...

UdeS-CoBIUS / SimSpliceEvol

SimSpliceEvol: Alternative splicing-aware simulation of biological sequence evolution

simulation evolution alternative-splicing transcriptomics graphical-user-interface exon-intron-structure transcript-phylogenies

Updated Jun 21, 2024
Python

sanjanabhatnagar / Inferring-Exon-and-Intron-Metadata-from-.gff-file

This pipeline infers exon functional annotations using coordinates from a .gff file and derives corresponding intron coordinates along with relevant annotations. Users can optionally specify the length of intronic fragments to extract. The pipeline is suited for splicing code analyses.

gff-toolkit gff splicing-analyses splicing introns intron-classification exon-annotation exon-intron-structure intron-annotation intron-coordinates

Updated Jun 27, 2025
Python

carbon

arielabade / carbon

🧬 Exon & Intron Classification Using BI-LSTM | Genomic Sequence Analysis with Deep Learning

machine-learning bioinformatics bioinformatics-analysis bi-lstm baseline-model exon-quantification classsification exon-intron-structure

Updated Apr 18, 2025
Jupyter Notebook

rnsharma478 / ChemEXIN

An exon-intron boundary prediction DL method utilizing physicochemical properties of DNA

machine-learning gene deep-learning genomics annotations 3d-cnn physicochemical-properties exon-intron-structure

Updated Jul 1, 2025
Python

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