Classification of 6 viruses including covid-19 based on their DNA sequences using Transformers
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Updated
Apr 18, 2023 - Jupyter Notebook
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dna-bert
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a dna sequence generation/classification using transformers
transformer seq2seq sequence-to-sequence gpt dna-sequences dna-sequencing encoder-decoder-model bert-model decoder-model llm dna-bert
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Updated
Jan 20, 2025 - Jupyter Notebook
Deep learning-based genomic sequence alignment using DNA-BERT, benchmarked against Smith-Waterman and BWA. Deployed via FastAPI for real-time usage.
benchmark bioinformatics deep-learning transformer sequence-alignment fastapi genomics-data dna-bert
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Updated
Feb 24, 2025 - Jupyter Notebook
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