Quality Assessment tool for fetal brain MRIs, able to score each volume through a deep learning regression model. Developed using Python3 and Keras/Tensorflow framework.
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Sep 1, 2023 - Python
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chris-app
Here are 63 public repositories matching this topic...
A ChRIS DS plugin to convert from medical image data files to display-friendly formats (like png and jpg).
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Feb 18, 2022 - Python
Automatic masking of fetal brain images using deep learning
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Nov 10, 2023 - Python
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Jun 21, 2022 - Python
An app to predict segmented brain MRI images from a given unsegmented brain MRI
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Oct 23, 2020 - Python
An app to efficiently perform cortical parcellation and segmentation on raw brain MRI images
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Oct 3, 2024 - Python
A Chris 'ds' plugin to retrieve file/folders from Amazon S3 service.
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Oct 27, 2021 - Python
A Chris 'ds' plugin to push files/folders in input directory to Amazon S3 service.
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Oct 27, 2021 - Python
IRTK fetal brain MRI reconstruction. https://pubmed.ncbi.nlm.nih.gov/22939612/
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Nov 10, 2023 - Python
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Oct 29, 2021 - Python
A GPU-aware matrix multiplier. Useful mainly for testing/benchmarking.
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Oct 25, 2021 - Python
A ChRIS plug-in which provides special utility to run "imagemagick" Linux CLI programs using the pfdo_run utility.
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Oct 25, 2021 - Python
A ChRIS DS plugin that can perform somewhat arbitrary (housekeeping) operations on patterns of input directories and files.
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Oct 4, 2024 - Python
Pre-populated "dummy" plugin that copies some contained prior FreeSurfer run to output
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Oct 22, 2021 - Python
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