CaptureC analysis pipeline with "lenient duplicate filtering" (VS03) - for short read lengths.
Not developed any more. Not even receiving bug fixes.
External users : http://userweb.molbiol.ox.ac.uk/public/telenius/CCseqBasicManual/index
Intra-WIMM users : http://userweb.molbiol.ox.ac.uk/public/telenius/captureManual/PipeSite.html