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Stothard Research Group

Genomics, genetics, and bioinformatics

8 followers
https://sites.ualberta.ca/~stothard/
stothard@ualberta.ca

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proksee-batch proksee-batch Public

Command-line tool for visualizing batches of prokaryotic genomes

Python 8

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Showing 6 of 6 repositories

proksee-batch Public
Command-line tool for visualizing batches of prokaryotic genomes

stothard-group/proksee-batch’s past year of commit activity

Python 8 MIT 0 2 9 Updated Jul 12, 2025
variant_calling_gatk4 Public
SNV and structural variant calling workflow updated to use GATK4

stothard-group/variant_calling_gatk4’s past year of commit activity

Python 1 GPL-3.0 0 0 0 Updated Nov 5, 2024
wgbs_workflow Public
Workflow for finding SNPs in whole genome bisulfite sequencing data

stothard-group/wgbs_workflow’s past year of commit activity

1 0 0 0 Updated Sep 28, 2022
variant-calling-pipeline Public
Snakemake pipeline for read mapping and variant calling

stothard-group/variant-calling-pipeline’s past year of commit activity

Python 1 0 0 0 Updated Sep 20, 2022
pigMLcore Public

stothard-group/pigMLcore’s past year of commit activity

R 0 0 0 0 Updated Mar 31, 2022
snp_conversion Public
Programs for transforming and merging SNP genotypes

stothard-group/snp_conversion’s past year of commit activity

Python 1 GPL-3.0 0 0 1 Updated Oct 27, 2021

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