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Jan 30, 2025
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25 changes: 10 additions & 15 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,11 @@ on:
push:
branches: [main, master]
pull_request:
branches: [main, master, patch-for-cran]
branches: [main, master]

name: R-CMD-check.yaml

name: R-CMD-check
permissions: read-all

jobs:
R-CMD-check:
Expand All @@ -18,40 +20,33 @@ jobs:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'devel'}
- {os: macos-latest, r: 'release'}
- {os: macos-latest, r: 'oldrel'}
- {os: windows-latest, r: 'devel'}
- {os: windows-latest, r: 'release'}
- {os: windows-latest, r: 'oldrel'}
- {os: ubuntu-latest, r: 'devel'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel'}
- {os: ubuntu-latest, r: 'oldrel-1'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
R_VERSION_TYPE: ${{ matrix.config.r }}

steps:
- uses: actions/checkout@v3
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
any::rcmdcheck
any::BH
any::RcppEigen
any::vdiffr
extra-packages: any::rcmdcheck, any::BH, any::RcppEigen, any::vdiffr
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'
29 changes: 19 additions & 10 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,10 @@ on:
push:
branches: [main, master]
pull_request:
branches: [main, master, patch-for-cran]

name: test-coverage
name: test-coverage.yaml

permissions: read-all

jobs:
test-coverage:
Expand All @@ -15,38 +16,46 @@ jobs:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v3
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
any::covr
any::vdiffr
extra-packages: any::covr, any::xml2, any::vdiffr
needs: coverage

- name: Test coverage
run: |
covr::codecov(
cov <- covr::package_coverage(
quiet = FALSE,
clean = FALSE,
install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
)
covr::to_cobertura(cov)
shell: Rscript {0}

- uses: codecov/codecov-action@v4
with:
# Fail if error if not on PR, or if on PR and token is given
fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}
file: ./cobertura.xml
plugin: noop
disable_search: true
token: ${{ secrets.CODECOV_TOKEN }}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v3
uses: actions/upload-artifact@v4
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
<!-- badges: start -->
[![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/bayesplot?color=blue)](https://cran.r-project.org/web/packages/bayesplot)
[![Downloads](https://cranlogs.r-pkg.org/badges/bayesplot?color=blue)](https://cran.rstudio.com/package=bayesplot)
[![R-CMD-check](https://github.com/stan-dev/bayesplot/workflows/R-CMD-check/badge.svg)](https://github.com/stan-dev/bayesplot/actions)
[![R-CMD-check](https://github.com/stan-dev/bayesplot/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/stan-dev/bayesplot/actions/workflows/R-CMD-check.yaml)
[![codecov](https://codecov.io/gh/stan-dev/bayesplot/branch/master/graph/badge.svg)](https://codecov.io/gh/stan-dev/bayesplot)
<!-- badges: end -->

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