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docs: better explain where to take the benchmark names from (#133)
release-please #173: Commit 44a1f43 pushed by famosab
June 23, 2025 10:32 17s main
June 23, 2025 10:32 17s
perf: update tools in conda environments (#132)
release-please #172: Commit 6d2dbc1 pushed by BiancaStoecker
June 23, 2025 10:14 21s main
June 23, 2025 10:14 21s
chore: update snakemake wrappers to 7.0.0 (#131)
release-please #171: Commit d7d9f0e pushed by BiancaStoecker
June 12, 2025 09:34 23s main
June 12, 2025 09:34 23s
fix: link to snakemake workflow catalog (#129)
release-please #170: Commit 1c49f2f pushed by BiancaStoecker
May 22, 2025 09:11 28s main
May 22, 2025 09:11 28s
fix: use buffered and script based get-reads implementation (#126)
release-please #169: Commit b9d4360 pushed by johanneskoester
May 22, 2025 08:40 26s main
May 22, 2025 08:40 26s
chore: release 1.12.2 (#122)
release-please #168: Commit 6dc4dca pushed by famosab
April 15, 2025 12:12 27s main
April 15, 2025 12:12 27s
fix: add dirs with results to rule all (#120)
release-please #167: Commit 4dfdf6d pushed by BiancaStoecker
April 15, 2025 12:09 29s main
April 15, 2025 12:09 29s
chore: release 1.12.1 (#119)
release-please #166: Commit 7710fc7 pushed by famosab
April 11, 2025 11:15 26s main
April 11, 2025 11:15 26s
fix: add .get() for optional values in config instead of dict access …
release-please #165: Commit 94d9294 pushed by BiancaStoecker
April 11, 2025 10:15 31s main
April 11, 2025 10:15 31s
chore: release 1.12.0 (#108)
release-please #164: Commit bf85471 pushed by famosab
April 3, 2025 13:28 24s main
April 3, 2025 13:28 24s
fix: add rule merge_callsets for snv/indel callsets (#115)
release-please #163: Commit 7e5fdde pushed by BiancaStoecker
April 3, 2025 13:04 26s main
April 3, 2025 13:04 26s
fix: link to truth vcf for na12878-somatic (#116)
release-please #162: Commit 724ce2d pushed by BiancaStoecker
April 3, 2025 08:49 29s main
April 3, 2025 08:49 29s
fix: catch when FORMAT field is present in truth (#114)
release-please #161: Commit 0e8e4be pushed by famosab
April 1, 2025 14:38 59s main
April 1, 2025 14:38 59s
feat: automate picking of rename file based on reference genome used …
release-please #160: Commit 2bbb9ae pushed by BiancaStoecker
February 20, 2025 08:46 29s main
February 20, 2025 08:46 29s
feat: Add heatmap coloring for coverage stratification in fp fn repor…
release-please #159: Commit e0d3ea9 pushed by johanneskoester
January 23, 2025 12:25 28s main
January 23, 2025 12:25 28s
fix: change vaf_field to dict (#110)
release-please #158: Commit e78abbb pushed by BiancaStoecker
January 13, 2025 08:12 29s main
January 13, 2025 08:12 29s
feat: Report FP / FN negative variants in single table (#107)
release-please #157: Commit 0464700 pushed by BiancaStoecker
December 13, 2024 09:34 31s main
December 13, 2024 09:34 31s
perf: update datavzrd wrapper (#104)
release-please #156: Commit db68793 pushed by johanneskoester
November 5, 2024 09:16 32s main
November 5, 2024 09:16 32s
fix: fix missing index as input for restrict_to_reference_contigs (#102)
release-please #155: Commit c55c503 pushed by johanneskoester
November 2, 2024 16:39 21s main
November 2, 2024 16:39 21s
chore: release 1.11.7 (#98)
release-please #154: Commit 44aaecb pushed by johanneskoester
September 12, 2024 12:34 30s main
September 12, 2024 12:34 30s
fix: restrict calls to reference contigs (#101)
release-please #153: Commit 0413580 pushed by johanneskoester
September 12, 2024 10:37 30s main
September 12, 2024 10:37 30s
fix: Only append labels in first iteration of storage loop; calculate…
release-please #152: Commit 20a469a pushed by johanneskoester
August 26, 2024 08:18 24s main
August 26, 2024 08:18 24s
chore: release 1.11.6 (#95)
release-please #151: Commit b532aa3 pushed by johanneskoester
August 6, 2024 08:25 22s main
August 6, 2024 08:25 22s
fix: hide sort_index in results table (#94)
release-please #150: Commit bb72674 pushed by johanneskoester
August 6, 2024 08:23 30s main
August 6, 2024 08:23 30s
chore: release 1.11.5 (#93)
release-please #149: Commit cfd7c64 pushed by johanneskoester
July 12, 2024 15:31 21s main
July 12, 2024 15:31 21s