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Penultimate 2024 notebook testing #9

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Merged
merged 9 commits into from
Oct 15, 2024
Merged

Penultimate 2024 notebook testing #9

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75c4d06
update for mth5 clients
kkappler Oct 14, 2024
fdf9969
Sync 02 with aurora patches, including FC demo
kkappler Oct 14, 2024
82b7082
Sync 02 with aurora patches, including FC demo
kkappler Oct 14, 2024
08891b1
tested in penultimate env
kkappler Oct 14, 2024
e25ba62
passing penultime, with sample_rate CRITICAL warning
kkappler Oct 14, 2024
ffae7a3
passing local penultuimate env
kkappler Oct 14, 2024
3f1f92b
confirm critial error no longer present
kkappler Oct 15, 2024
30dcae7
confirm critial error no longer present
kkappler Oct 15, 2024
41396e8
remove redundant notebooks
kkappler Oct 15, 2024
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565 changes: 180 additions & 385 deletions notebooks/aurora/01_operate_aurora.ipynb
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1,104 changes: 725 additions & 379 deletions notebooks/aurora/02_synthetic_data_processing.ipynb
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30 changes: 15 additions & 15 deletions notebooks/aurora/03_processing_configuration.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -193,7 +193,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"\u001b[1m24:08:28T15:59:26 | INFO | line:761 |mth5.mth5 | close_mth5 | Flushing and closing /home/kkappler/software/irismt/aurora/data/synthetic/mth5/test12rr.h5\u001b[0m\n"
"\u001b[1m24:10:14T13:39:26 | INFO | line:777 |mth5.mth5 | close_mth5 | Flushing and closing /home/kkappler/software/irismt/aurora/data/synthetic/mth5/test12rr.h5\u001b[0m\n"
]
},
{
Expand Down Expand Up @@ -318,11 +318,11 @@
"name": "stdout",
"output_type": "stream",
"text": [
"\u001b[1m24:08:28T15:59:26 | INFO | line:250 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column fc, adding and setting dtype to <class 'bool'>.\u001b[0m\n",
"\u001b[1m24:08:28T15:59:26 | INFO | line:250 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column remote, adding and setting dtype to <class 'bool'>.\u001b[0m\n",
"\u001b[1m24:08:28T15:59:26 | INFO | line:250 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column run_dataarray, adding and setting dtype to <class 'object'>.\u001b[0m\n",
"\u001b[1m24:08:28T15:59:26 | INFO | line:250 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column stft, adding and setting dtype to <class 'object'>.\u001b[0m\n",
"\u001b[1m24:08:28T15:59:26 | INFO | line:250 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column mth5_obj, adding and setting dtype to <class 'object'>.\u001b[0m\n"
"\u001b[1m24:10:14T13:39:26 | INFO | line:262 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column fc, adding and setting dtype to <class 'pandas._libs.missing.NAType'>.\u001b[0m\n",
"\u001b[1m24:10:14T13:39:26 | INFO | line:262 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column remote, adding and setting dtype to <class 'bool'>.\u001b[0m\n",
"\u001b[1m24:10:14T13:39:26 | INFO | line:262 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column run_dataarray, adding and setting dtype to <class 'NoneType'>.\u001b[0m\n",
"\u001b[1m24:10:14T13:39:26 | INFO | line:262 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column stft, adding and setting dtype to <class 'NoneType'>.\u001b[0m\n",
"\u001b[1m24:10:14T13:39:26 | INFO | line:262 |mtpy.processing.kernel_dataset | _add_columns | KernelDataset DataFrame needs column mth5_obj, adding and setting dtype to <class 'NoneType'>.\u001b[0m\n"
]
},
{
Expand Down Expand Up @@ -386,7 +386,7 @@
" <td>EMTF Synthetic</td>\n",
" <td>&lt;HDF5 object reference&gt;</td>\n",
" <td>&lt;HDF5 object reference&gt;</td>\n",
" <td>False</td>\n",
" <td>&lt;NA&gt;</td>\n",
" <td>False</td>\n",
" <td>None</td>\n",
" <td>None</td>\n",
Expand All @@ -409,7 +409,7 @@
" <td>EMTF Synthetic</td>\n",
" <td>&lt;HDF5 object reference&gt;</td>\n",
" <td>&lt;HDF5 object reference&gt;</td>\n",
" <td>False</td>\n",
" <td>&lt;NA&gt;</td>\n",
" <td>True</td>\n",
" <td>None</td>\n",
" <td>None</td>\n",
Expand All @@ -436,9 +436,9 @@
"0 [ex, ey, hz] 001 1.0 1980-01-01 00:00:00+00:00 test1 \n",
"1 [ex, ey, hz] 001 1.0 1980-01-01 00:00:00+00:00 test2 \n",
"\n",
" survey run_hdf5_reference station_hdf5_reference fc \\\n",
"0 EMTF Synthetic <HDF5 object reference> <HDF5 object reference> False \n",
"1 EMTF Synthetic <HDF5 object reference> <HDF5 object reference> False \n",
" survey run_hdf5_reference station_hdf5_reference fc \\\n",
"0 EMTF Synthetic <HDF5 object reference> <HDF5 object reference> <NA> \n",
"1 EMTF Synthetic <HDF5 object reference> <HDF5 object reference> <NA> \n",
"\n",
" remote run_dataarray stft mth5_obj \n",
"0 False None None None \n",
Expand Down Expand Up @@ -551,7 +551,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"\u001b[1m24:08:28T15:59:26 | INFO | line:108 |aurora.config.config_creator | determine_band_specification_style | Bands not defined; setting to EMTF BANDS_DEFAULT_FILE\u001b[0m\n"
"\u001b[1m24:10:14T13:39:26 | INFO | line:108 |aurora.config.config_creator | determine_band_specification_style | Bands not defined; setting to EMTF BANDS_DEFAULT_FILE\u001b[0m\n"
]
}
],
Expand Down Expand Up @@ -1411,9 +1411,9 @@
],
"metadata": {
"kernelspec": {
"display_name": "aurora-test",
"display_name": "penultimate_2024",
"language": "python",
"name": "aurora-test"
"name": "penultimate_2024"
},
"language_info": {
"codemirror_mode": {
Expand All @@ -1425,7 +1425,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.10.10"
"version": "3.10.15"
}
},
"nbformat": 4,
Expand Down
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