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sdegeorgia/README.md

Hi, I'm Sophia! πŸ‘‹

I'm a computational biologist with a Ph.D. and a strong focus on next-generation sequencing and multi-omics integration. I enjoy building tools and pipelines that help make sense of messy, complex biological data, especially when it leads to new insights about how cells behave.

Most of my experience is in R, bash, and Python, working with large-scale genomic datasets to support everything from CRISPR screens to chromatin accessibility and CNV analysis. I like taking problems from raw data all the way through to clean, interpretable results β€” and making those workflows reproducible for the rest of the team.

Recent work:

I'm native in both English πŸ‡ΊπŸ‡Έ and German πŸ‡©πŸ‡ͺ
Beyond science, I channel my focus into endurance sports and hands-on problem solving β€” from triathlon training to home renovations.

πŸ“« Connect with me on LinkedIn
Pronouns: she/her

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  1. CANVAS-summary CANVAS-summary Public

    CNV Analysis Next-gen Variant Assessment Suite

  2. LAAVA-summary LAAVA-summary Public

    A comprehensive pipeline for detecting, characterizing, and visualizing recombinant AAV (rAAV) integration sites using Oxford Nanopore long-read sequencing data.

  3. Melanoma_Drug_Resistance_Data Melanoma_Drug_Resistance_Data Public

    Analysis of gene expression, chromatin accessibility, and resistance phenotypes in melanoma cell lines treated with targeted therapies.

  4. Freezer-Map Freezer-Map Public

    Smart Freezer Tracking for Smarter Science

  5. Capsule-Wardrobe-Generator Capsule-Wardrobe-Generator Public

    A playful and interactive outfit generator built with HTML, CSS, and vanilla JavaScript.

    HTML

  6. ONCORE ONCORE Public

    ONCOgenic Regulatory Element discovery

    Python