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@sct-pipeline

sct-pipeline

This site gathers various pipelines compatible with the Spinal Cord Toolbox (SCT) for processing MRI data.

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  1. gm-challenge gm-challenge Public

    Spinal cord gray matter imaging challenge

    Python 8 3

  2. bavaria-quebec bavaria-quebec Public

    Bavaria (TUM) and Quebec (Polytechnique) collaboration on a project on spinal cord MS lesion segmentation.

    Shell 6 1

  3. contrast-agnostic-softseg-spinalcord contrast-agnostic-softseg-spinalcord Public

    Contrast-agnostic spinal cord segmentation project with softseg

    Python 5 3

  4. fmri-segmentation fmri-segmentation Public

    Repository for the project on automatic spinal cord segmentation based on fMRI EPI data

    Python 5 1

  5. ukbiobank-spinalcord-csa ukbiobank-spinalcord-csa Public

    Measure of the averaged cross-sectional area (cord CSA) between C2 and C3 of the spinal cord with UK Biobank Brain MRI dataset.

    Python 4

  6. gm-challenge-data gm-challenge-data Public

    Dataset for the gray matter acquisition challenge

    3 1

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