Note: Our package has been renamed from QuasiCopula.jl to ApproxCopula
Scripts to reproduce the experiments performed for the ApproxCopula manuscript:
MSE: Scripts for reproducing simulation studies comparing with MixedModels.jl. It can run withQuasiCopulav0.1.0.nb_vs_Rpackages: Scripts for negative binomial random intercept GLMM simulation study comparison with R packageslme4,glmmTMB,GLMMadaptive. It can run withQuasiCopulav0.1.0.real_data_examples: Scripts for bivariate example analyses using NHANES I Epidemiologic Followup Study data. It can run withQuasiCopulav0.1.0.
If you use OpenMendel analysis packages in your research, please cite the following reference in the resulting publications:
OPENMENDEL: a cooperative programming project for statistical genetics. Zhou H, Sinsheimer JS, Bates DM, Chu BB, German CA, Ji SS, Keys KL, Kim J, Ko S, Mosher GD, Papp JC, Sobel EM, Zhai J, Zhou JJ, Lange K. Hum Genet. 139, 61–71 (2020). doi:10.1007/s00439-019-02001-z. PMID: 30915546