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@sanger-pathogens

Pathogen Informatics, Wellcome Sanger Institute

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  1. Roary Roary Public

    Rapid large-scale prokaryote pan genome analysis

    Perl 348 192

  2. snp-sites snp-sites Public

    Finds SNP sites from a multi-FASTA alignment file

    C 261 49

  3. Artemis Artemis Public

    Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

    Java 247 77

  4. circlator circlator Public

    A tool to circularize genome assemblies

    Python 242 57

  5. ariba ariba Public

    Antimicrobial Resistance Identification By Assembly

    Python 177 56

  6. assembly-stats assembly-stats Public

    Get assembly statistics from FASTA and FASTQ files

    C++ 120 21

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