Releases: saezlab/decoupler-py
Releases · saezlab/decoupler-py
v2.0.4
v2.0.3
v2.0.2
Small patch with the following bug fixes:
- Added
ipywidgets
as dependency - Silenced
xgboost
warnings - Handled corner case in
bm.metric.auc
when scores are all 0 - Fixed error in
bm.metric.hmean
when metrics werestr
instead oflist
- Fixed error when obs col is
list
indc.pp.pseudobulk
- Allowed ordering functions (
dc.pp.bin_order
,dc.pl.order
anddc.pl.order_targets
) not to be bound between 0 and 1
v2.0.1
v2.0.0
decoupler 1.6.0
What's Changed
- Benchmark dev by @demian1 in #8
- Merge benchmark devel branch by @PauBadiaM in #17
- Added the bulk liana analysis at the end of bulk notebook by @adugourd in #26
- association between embeddings and sample metadata using simple anova model by @demian1 in #58
- updated docs by @demian1 in #60
- minor doc fix by @fedor-grigoryev in #40
- Updated benchmark to remove NAs in activities by @smuellerd in #62
- [WIP] Add lead_genes and n_genes to enrichment results by @pcm32 in #41
- removes dtype from anndata by @Intron7 in #79
- Fix formatting by @Zethson in #100
- Tutorial clustermap changed to Marsilea by @shuang1330 in #96
New Contributors
- @demian1 made their first contribution in #8
- @PauBadiaM made their first contribution in #17
- @adugourd made their first contribution in #26
- @fedor-grigoryev made their first contribution in #40
- @smuellerd made their first contribution in #62
- @pcm32 made their first contribution in #41
- @Intron7 made their first contribution in #79
- @Zethson made their first contribution in #100
- @shuang1330 made their first contribution in #96
Full Changelog: https://github.com/saezlab/decoupler-py/commits/v1.6.0