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BeforeTheyHatch

Downloading the Dataset

To download the raw images:

wget https://zenodo.org/records/6390798/files/embryo_dataset.tar.gz?download=1

Extract the compressed file:

tar -xvzf embryo_dataset.tar.gz\?download\=1

To download the annotations:

wget https://zenodo.org/records/6390798/files/embryo_dataset_annotations.tar.gz?download=1

Extract the compressed file:

tar -xvzf embryo_dataset_annotations.tar.gz\?download\=1

Demo

demo.ipynb contains a demonstration of the model and its outputs. Run its cells to visualize a sample embryo image, the model's prediction, and a heatmap visualizing the significant features in the model's prediction.

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