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cna_utils

A bunch of tools for copy number analysis.

Documentation

Detailed information on the prerequisite software packages, preparing the reference genome, and step by step guide to copy number profile generation can be found here.

Contact info

Rishvanth Prabakar kaliapp@cshl.edu

Copyright and License Information

Copyright (C) 2020 Rishvanth Prabakar

Authors: Rish Prabakar

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.

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