data processing

to access waveform data need to create a physionet account & get access export WFDB_USERNAME='your_username' export WFDB_PASSWORD='your_password'

generate_input_data.sh

• create_ic_p_mimic.py => downloads numerics data

• create_numerics_parquets.py

=> from numeric parquets + meds parquet => generate tensors in that order

• 1. create_med_tensors
• 2. create_ic_targets.py
• 3. create_context_tensors.py

Hybrid SDE

run.sh

Ablations

+/- encoder model

hybrid_sde_ablations.sh

Baselines

zenker_baseline.sh